Detailed information on CNT30710175


BLAST search results

BLAST vs Swiss-Prot:
sp|A6Q0K5|CP12_CHLRE, E-value = 2e-12

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674439Glycine maxSetaria viridis30.0550.6483.19119forward
CNT30523223Glycine maxSetaria italica30.8124.583.61122forward
CNT30515591Glycine maxJuglans regia30.8123.5181.97122forward
CNT30617555Glycine maxSesamum indicum32.8321.5986.92130forward
CNT30729972Glycine maxCorchorus capsularis33.3322.9282.58132forward
CNT30290105Glycine maxTriticum aestivum29.825.9985.59118forward
CNT30387749Glycine maxTriticum turgidum30.0518.6884.87119forward
CNT30246208Glycine maxAvena sativa30.8121.5285.25122forward
CNT30659185Glycine maxTriticum dicoccoides30.0522.3384.87119forward
CNT30134237Glycine maxLolium perenne30.0518.9284.03119forward
CNT30216686Glycine maxKalanchoe fedtschenkoi30.0520.7384.87119forward
CNT30620908Glycine maxCajanus cajan31.5717.6189.6125forward
CNT30723703Glycine maxLupinus angustifolius32.5817.8984.5129forward

Expression of CNT30710175

Peptides detected in this lncRNA

>peptide 1 (59 aa)
MGLDRAGNLTAWAFCAESIPLALANTLLGLERLTPPAIVTILFFFFSPLLSVFIVIERF*

Sequence

>CNT30710175
CAGAAGGTAAAAGTAATAGATGCATGCATGTAACTTTGGAATGACTGAGTTCAGTCATCAATTATCATAGGTGCGGCACTCATCAGTCTCTGGATTGTCC
TTGCAGTAATTTTCGAGCGGGTCAGACTGCTTCTGCTTCTCCCTGGCGTGGCTCGCCGCCGCGCTCAGCTCCTCCACCTCGTCCCAGGCCACTTTTGAAT
GGGCCTCGACAGAGCTGGAAACCTCACGGCCTGGGCCTTTTGTGCTGAGTCTATTCCCTTAGCATTAGCAAATACCCTGCTAGGGCTTGAAAGACTCACA
CCACCAGCTATTGTTACCATTCTTTTCTTCTTTTTTTCTCCTCTTTTGAGTGTTTTTATTGTAATAGAGAGGTTTTAATGTTGGGGGATAGCGAGG