Detailed information on CNT30710142


BLAST search results

BLAST vs Swiss-Prot:
sp|A4GYN8|RR12B_POPTR, E-value = 2e-44

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678334Glycine maxSetaria viridis39.2417.9992.57175forward
CNT3021516Glycine maxCitrullus lanatus39.019.4695.98174forward
CNT30730546Glycine maxCorchorus capsularis36.3227.4195.06162forward
CNT30406883Glycine maxBeta vulgaris30.0452.1488.81134forward
CNT30524944Glycine maxPhaseolus vulgaris97.7643.7896.33436forward
CNT30201813Glycine maxPisum sativum37.6710.2594.05168forward
CNT30492881Glycine maxOlea europaea26.0117.9886.21116forward
CNT30300194Glycine maxTriticum aestivum39.248.3292.57175forward
CNT30384007Glycine maxTriticum turgidum37.6719.2489.88168forward
CNT30569656Glycine maxActinidia chinensis37.6719.9594.05168forward
CNT3083498Glycine maxVigna radiata41.4879.7495.68185reverse complement
CNT30543269Glycine maxBrassica napus37.445.6495.81167forward
CNT30509374Glycine maxSolanum lycopersicum16.593790.5474forward
CNT3018194Glycine maxZea mays39.2429.8692.57175forward
CNT30610163Glycine maxGossypium raimondii57.1747.9383.14255forward
CNT30228329Glycine maxAnanas comosus29.3763.2993.13131forward
CNT30684722Glycine maxTriticum urartu52.6922.0283.83235forward
CNT30351849Glycine maxEragrostis tef22.224.8788.8999reverse complement
CNT30355468Glycine maxLactuca sativa39.2414.3196.57175forward
CNT30416238Glycine maxPapaver somniferum39.2422.8594.86175forward
CNT30324879Glycine maxAsparagus officinalis44.3956.4185.86198reverse complement
CNT30331679Glycine maxDioscorea rotundata37.6724.5394.05168forward
CNT30100515Glycine maxOryza rufipogon21.5237.888.5496reverse complement
CNT30604848Glycine maxOryza punctata39.4653.8280.11176reverse complement

Expression of CNT30710142

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MKFSLHMTPRSILLKSLDLFPSSVRESLPFFYSVPKTN*

Sequence

>CNT30710142
CGCACTAGAACGCCCTTGTTGACGATCCTTTACTCCAACAGCATCTAGGGTTCCTCGAACAATGTGATATGTCACACCGGGTAAATCTTTAACCCTCCCC
CCTCTTACTAAGACTACAGAATGTTCTTGTAAATTATGGTCAATACCGGGTATATAAGCAGTAATTTCAAATCCAAAGTTTGGTTTTTTGGGTGTAATAG
TGGAAAAGTTGACAGATAAGTCACCCTTACTGCCACTCTACAGAACCGTACATGAAATTTTCACTTCATATGACTCCTCGTTCAATTCTTTTGAAGTCAT
TGGATCTGTTTCCTAGTTCGGTTCGAGAATCTCTCCCCTTCTTCTATTCCGTTCCGAAGACTAACTAGGACCAATTCTATCACGTTTTCATGTTCCAATT
GAACACTTTCCTTTTTTATTATTCTCAAAGAAGAATATATCCCTTT