Detailed information on CNT30710115


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30515299Glycine maxJuglans regia23.1719.0884.2195forward
CNT30650912Glycine maxRosa chinensis23.913.584.6998forward
CNT30621639Glycine maxCajanus cajan25.3710.6493.27104forward
CNT30704079Glycine maxPrunus avium25.1237.1885.44103forward
CNT30723266Glycine maxLupinus angustifolius25.3715.5784.62104forward

Expression of CNT30710115

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MLSHSAPMLLLTGSVAFWKVAERRRRKWWWPGS*

>peptide 2 (33 aa)
QPSKTEITKAREETKQQKKTKNTNTNIVLYYNL*

Sequence

>CNT30710115
CAACCGTCCAAAACAGAAATTACCAAAGCCAGAGAAGAGACAAAACAGCAGAAGAAAACTAAGAACACAAATACCAACATAGTTTTATACTACAATTTAT
AAAGTAAAACTAAAACTTAAGAAAACGCCATTTATTAATTATTAGCCTTCTAGTAAATTAAGTGACGGTTGGGCACAACGACGTCGTCCAGCATCCACAG
GTCATCCATGTTGTCCCACTCAGCACCAATGTTGTTGCTAACAGGCAGCGTTGCTTTTTGGAAGGTGGCGGAGCGGCGGCGGCGGAAATGGTGGTGGCCG
GGAAGTTGAGCTTGGCCTTGTCGCCGCGGATGCGTATGGCGGCGTCGTCGTAGGCTTGGGCGGCTTCTTCGGCGGTGGGGAAGGTGCCGAGCCAGACACG
AACACCCTTG