Detailed information on CNT30710098


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT003894, E-value = 3e-65

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30616920Glycine maxSesamum indicum58.618.8391.3184forward
CNT30309040Glycine maxTriticum aestivum59.2444.3991.94186forward
CNT3082954Glycine maxBrassica juncea46.8212.4689.8147reverse complement
CNT30609809Glycine maxGossypium raimondii56.0541.4187.5176reverse complement
CNT30623039Glycine maxDaucus carota40.4548.4793.7127forward
CNT30364323Glycine maxSorghum bicolor57.6450.1491.71181forward
CNT30332809Glycine maxDioscorea rotundata60.5127.595.79190forward
CNT30150010Glycine maxBrachypodium distachyon59.2456.8891.94186forward
CNT30100804Glycine maxOryza rufipogon59.2423.1691.94186reverse complement
CNT30574740Glycine maxOryza barthii59.2437.891.94186reverse complement
CNT30603500Glycine maxOryza punctata41.450.5894.62130reverse complement

Expression of CNT30710098

Peptides detected in this lncRNA

>peptide 1 (55 aa)
FALLKPTFSLPLRPALLARVLPSKAERSPTDSFLHPTASADRLAPFIFGARALDQ*

>peptide 2 (42 aa)
LRYSSRHSRFRFVQHCSRGSFPLRRNAPLPILFYIPQLQQIA*

Sequence

>CNT30710098
TTTGCGTTACTCAAGCCGACATTCTCGCTTCCGCTTCGTCCAGCACTGCTCGCGCGGGTCCTTCCCTCTAAGGCGGAACGCTCCCCTACCGATTCTTTTT
TACATCCCACAGCTTCAGCAGATCGCTTAGCCCCGTTCATCTTCGGCGCAAGAGCGCTCGATCAGTGAGCTATTACGCACTCTTTCAAGGCGGTCATTTA
GGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCGACGATGAAGCTTATCCCCCATCGTCTCACTGGCCGACCTTGACCCTTGTTATTTTGAGGTCAT
ATCTAGTATTGAGA