Detailed information on CNT30710011


BLAST search results

BLAST vs Swiss-Prot:
sp|Q39654|PSAL_CUCSA, E-value = 8e-66

BLAST vs NONCODE:
NONMTRT001761, E-value = 2e-30

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30533956Glycine maxEucalyptus grandis50.2331.0981.57217forward
CNT30376200Glycine maxArabidopsis thaliana20.379.1285.2388forward
CNT30629841Glycine maxVigna unguiculata63.8947.1887.32276forward
CNT30507458Glycine maxNicotiana attenuata43.5212.4880.85188forward
CNT30238125Glycine maxBrassica oleracea23.618.784.31102forward
CNT30129085Glycine maxCorymbia citriodora46.0618.981.91199forward
CNT30644515Glycine maxCannabis sativa29.8622.3286.05129forward
CNT3031830Glycine maxTheobroma cacao45.1453.4283.59195forward
CNT3037832Glycine maxCucumis melo50.2325.7780.65217forward
CNT30104607Glycine maxOryza rufipogon17.1320.6189.1974forward
CNT30726871Glycine maxLupinus angustifolius97.9223.5783.22423forward
CNT3049017Glycine maxCucumis sativus47.692180.58206forward

Expression of CNT30710011

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MGPPEGIRGPGPPRSLLVVGSLRFCMRAGWTSTMRSKGWM*

Sequence

>CNT30710011
AAGCTAGTAAGCACATTCATCATTTGATGTAGTATGGAAGGTCCAAGACGTAGAGGAGGAAGTAGGCCCAAATAACACCCGAAATGCCTCCGAAGAAGAA
GCCTCCGGTGAACTTGGCCCACCCATCAGCAGTTTGGAGCTGATCGGGCTCCTTCTTGCTGAGGATCACCACAAGCCCACCGGCGGCCAGAGAGCCCGCT
TGCCCGGCGATCTCGGTGTTCCTAAGAGGCCCGGCCTTCACGAATGGGCCCACCAGAAGGTATCCGTGGGCCAGGCCCACCTCGATCCCTCTTAGTAGTG
GGCTCACTGCGGTTCTGTATGCGGGCAGGTTGGACAAGTACCATGCGATCAAAGGGCTGGATGTAACTGGGGTTTCCAGGCTTCCAATGAATGGGTCACC
GTTGATTGGCTGAATCACTTGATAGGTTGGCT