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Detailed information on CNT30709978


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SRW0|SAU28_ARATH, E-value = 3e-07

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30526713Glycine maxPhaseolus vulgaris9.0824.3786.7668forward
CNT30144937Glycine maxMedicago truncatula20.5637.1183.12154forward
CNT30620100Glycine maxCajanus cajan30.0423.8688.44225forward

Expression of CNT30709978

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MLLFCRTIWTIACSSEKLYLRTHILFREL*

>peptide 2 (48 aa)
MPAVQFLSQPQLLYVTLLQNNMDYSMFKREAISKNTYSFQGIVRPPIG*

>peptide 3 (35 aa)
MSVFQMKTHCFCSTLNELQNDLIGLVKECNEFEFC*

Sequence

>CNT30709978
TGTCGTGCTTGTGCTGTATGTATTTAATTCATTCAGATAGATAGATAAAAAGTAAGGATTTCATAAATTCATCATAACTGTTTGTCTGTTTGGTAGATTA
TCATTGAGATGTCATGACTTTTTTTACAACATCTGGGTTAACATAAAAATGAAAAGCAATAATGCCTGCTGTACAATTTTTGTCTCAACCACAACTACTC
TATGTTACTCTTCTGCAGAACAATATGGACTATAGCATGTTCAAGCGAGAAGCTATATCTAAGAACACATATTCTTTTCAGGGAATTGTGAGACCTCCCA
TAGGATGATAGTAGTGGAACTCGTCTTCAGCTTGTTTTAGCAATTCTTGAAACAAAAGGTTGATTCAAGAATGCTATGGGAATCGTGAACCTTTTTGTTT
TCTCTCCAACATAAACTGCAACATATCCTTTTGGGACTTCCACAACCTTGCTAACAGCTTGGCTAGTAAATTATGTCCGTCTTCCAAATGAAAACCCATT
GTTTTTGCTCTACACTCAATGAACTACAAAATGATCTCATAGGACTAGTGAAAGAATGCAATGAATTTGAATTCTGCTGATTCAGTGTAAGAATGACTTG
TGCTGCTTGTATGCTCAATGACATACACACAGATATATAGATAGCCTTTGTCTCTTGAATTGGAAGGTGAATGTACTATTTGATGGGGTCAAGGGAGAGA
CAGGGTTCATTAAGGTTCACATGATATGTCTTGGTTAGGTTAACATCAG