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Detailed information on CNT30709943


BLAST search results

BLAST vs Swiss-Prot:
sp|P0C7Q7|PPR38_ARATH, E-value = 3e-49

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3084098Glycine maxVigna radiata45.1746.3678.6299forward

Expression of CNT30709943

Peptides detected in this lncRNA

>peptide 1 (60 aa)
MVTPLENLGQYREIESNLTHMTETINENIQSKKVRLNSLEFQSVRKGNSGGIVLHLCKGI*

>peptide 2 (29 aa)
MTHTQHAIELGNGIVNILNGWGLRVKVRM*

Sequence

>CNT30709943
ATTCCCTTGACAGTCATTTCAGAAAATAAACCATAAGCCTCACTTACAAGTTGATATTTGCACAGGGCGTCAATAATTGTGCTGTACATTACCACGTTAG
GTTTAGTCAGTCGTCCATCAATCTTTTGCAGCAACTTGATGGCAGCTCTTGTGTCTCCTATCTTGCATACTCCATTGATCAAAGTCCCATAACTAACTTG
ATTGAGTTGAAATCCTTGTGCTAATAGCTTGTCGTGAAAGTGCAGTGCTTTCTTGACTTGTCCCTTAAGACAGAGACCTTTGATGAGTGTTGTGAAGGTT
ATGGTGTCGGGATGGTAACCCCTCTTGAGAATCTTGGCCAATATAGAGAAATTGAAAGTAATTTGACCCATATGACAGAAACAATTAATGAGAATATTCA
AAGTAAAAAGGTCAGGCTGAATTCCCTTGAGTTCCAATCGGTGAGAAAGGGAAACAGCGGTGGAATAGTGCTTCATCTTTGCAAAGGAATCTAAAATCTT
GTTAAATTGGATGATGGGTGGGGTATGACGCATACACAGCATGCGATTGAATTGGGAAACGGCATCGTCAACATTTTGAATGGATGGGGGCTGAGAGTGA
AAGTGAGAATGTGAGGAGTTTTGAAGAAAAGAGGAAAAATTGGGAATGGAAAGAGAGACAGA