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Detailed information on CNT30709901


BLAST search results

BLAST vs Swiss-Prot:
sp|P09756|CB23_SOYBN, E-value = 3e-109

BLAST vs NONCODE:
NONMTRT001605, E-value = 5e-57

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30714756Glycine maxMalus domestica golden51.7746.0184.8467forward
CNT3055180Glycine maxAmborella trichopoda54.147.2483.81488forward

Expression of CNT30709901

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MLTLPTSGADGPSFTALPAKDGDERAMEEAAAIF*

>peptide 2 (32 aa)
MANRPFLSSFTLSSAKASGSSARPNGSKLPPG*

>peptide 3 (37 aa)
MGPASRPCQPRMGMREPWKKLLPFFNSRMSFALCFVL*

Sequence

>CNT30709901
GGCGTCAAAAGCTTAGAAGTATAAAATGAGAGAACAAATTGACACTTGAGTTTTGTAAAAAGCAAGTAACATTAAGTTGGATTCGGATACACAAGATAAT
TCACATTATCTGAAGTACTTCACCAAACACAAATCTAAAAACTCTCAAAAGTCATTTCGTTCTTTGACGCTCACTTTCCGGGGACGAAGTTGGTGATCGG
CGAGGTTCTCCAATGGACCCTTTCCGGTGACAATGGCCTGAACAAAGAAGCCAAACATAGAGAACATGGCCAATCGTCCGTTCTTGAGTTCCTTCACCTT
AAGCTCAGCAAAAGCCTCTGGGTCATCAGCAAGGCCCAATGGGTCGAAGCTGCCACCTGGGTAGATTGGGTCAGTGACCTCACCGAGGGGGCCACCAGCA
ATACGGTAACCTTCAACGGCACCCATTAGGATAACTTGTGTGGCCCAGATGGCGAGGATGCTCTGGGCGTGGATCAGGCTTGGGTTGCCCAAGTAGTCGA
GCCCACCCTCGCTGAAGATCTGGGACCCGGCCTTGAACCACACGGCTTCTCCGAACTTCACCCCGTTGCGGGACAGCAACTCCGGGAAGACGCAGCCCAA
GGCTCCGAGCATGGCCCACCTGGAGTGGATCACTTCGAGTTCACGGTTCTTGGCGAAGAGAATGGGCCCAAGTACTTGACTCGGTCTGGGCCGTACCATG
GGCTTCCTGAGGAGACCTGCTTGGTGACGGTCTTCCTCATGCTCACCCTTCCCACTTCTGGGGCTGATGGGCCCAGCTTCACGGCCTTGCCAGCCAAGGA
TGGGGATGAGAGAGCCATGGAAGAAGCTGCTGCCATTTTTTAACTCAAGGATGAGCTTTGCTTTGTGCTTTGTGTTATGAGTGTTTTGAAGTGGTGAGTG
AC