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Detailed information on CNT3070976

BLAST search results

BLAST vs Swiss-Prot:
sp|P27494|CB23_TOBAC, E-value = 1e-49

BLAST vs NONCODE:
NONSTUT002514, E-value = 6e-46

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30639243	Quercus suber	Nymphaea colorata	29.72	16.03	84.11	151	forward
CNT30317234	Quercus suber	Corylus avellana	45.87	38.01	87.55	233	forward
CNT30701229	Quercus suber	Quercus lobata	99.61	26.03	95.06	506	forward
CNT30374000	Quercus suber	Arabidopsis thaliana	73.43	42.48	81.77	373	forward
CNT30500934	Quercus suber	Coffea canephora	58.46	18.52	80.81	297	forward
CNT30379012	Quercus suber	Manihot esculenta	74.61	46.62	85.49	379	forward
CNT30404043	Quercus suber	Beta vulgaris	43.5	20.04	82.35	221	forward
CNT30526271	Quercus suber	Phaseolus vulgaris	34.25	26.13	89.08	174	forward
CNT30631012	Quercus suber	Vigna unguiculata	62.8	25.12	85.89	319	forward
CNT30711475	Quercus suber	Glycine max	52.56	18.31	86.89	267	forward
CNT30561790	Quercus suber	Actinidia chinensis	61.61	45.3	83.07	313	forward
CNT30539463	Quercus suber	Brassica napus	55.91	39.34	82.39	284	forward
CNT30238958	Quercus suber	Brassica oleracea	70.28	40.48	81.79	357	forward
CNT30510148	Quercus suber	Solanum lycopersicum	45.47	54.48	82.25	231	forward
CNT30172025	Quercus suber	Trifolium pratense	73.03	32.15	83.56	371	forward
CNT30311404	Quercus suber	Camelina sativa	70.28	54.34	81.51	357	forward
CNT3077068	Quercus suber	Brassica juncea	70.28	35.17	81.23	357	forward
CNT30264220	Quercus suber	Brassica rapa	70.28	44.29	81.51	357	forward
CNT30612591	Quercus suber	Arabis alpina	71.65	45.61	81.87	364	forward
CNT30605018	Quercus suber	Gossypium raimondii	60.83	48.66	85.76	309	forward
CNT3067083	Quercus suber	Leersia perrieri	31.69	42.71	86.96	161	forward
CNT30648173	Quercus suber	Rosa chinensis	68.11	19.92	84.39	346	forward
CNT30204126	Quercus suber	Helianthus annuus	70.08	69.53	81.46	356	forward
CNT30716010	Quercus suber	Malus domestica golden	44.88	39.31	85.53	228	forward
CNT30625449	Quercus suber	Daucus carota	60.63	33.48	83.44	308	forward
CNT30480204	Quercus suber	Arabidopsis halleri	66.14	92.82	82.14	336	forward
CNT30360875	Quercus suber	Lactuca sativa	43.11	29.16	83.11	219	forward
CNT30410959	Quercus suber	Papaver somniferum	71.85	41.06	80.27	365	forward
CNT30645477	Quercus suber	Cannabis sativa	18.9	25.2	88.54	96	forward
CNT30119392	Quercus suber	Citrus clementina	41.34	22.85	85.24	210	forward
CNT3035928	Quercus suber	Cucumis melo	51.77	55.49	83.27	263	forward
CNT30331118	Quercus suber	Dioscorea rotundata	33.86	29.4	83.72	172	forward
CNT30723501	Quercus suber	Lupinus angustifolius	70.08	32.96	84.27	356	forward
CNT30114814	Quercus suber	Eutrema salsugineum	72.24	44.54	82.02	367	forward

Expression of CNT3070976

Peptides detected in this lncRNA

>peptide 1 (75 aa)
MVEEVLNWAFPSNNSLNKETKHGEHCKPPILEFLNLQFCECFGIISQSKWVKGTTRGKWGQVLHRVVLHQLCTLQ*

>peptide 2 (44 aa)
MSKVTVEHLSFFIFQGQSWWRKPMHYWLLGQQHGRRGSQLGLSQ*

>peptide 3 (83 aa)
MENIASLPFLSSLTFNSANASGSSASPSGSKAPPGVNGVKSFTEWSSTNSVPFNEAHKHNLNSPNCQDALCMNQVWVAKIIKTT

Sequence

>CNT3070976
AATATATAGTTTGAAGAAAAGCAGTTTGTGGTAGCATCAATACAATATAGATGAACACAGCAAGAGAGAAGTTGAACACAAGCAAGAAGATTGATGAGTA
AAGTTACAGTGGAACATTTAAGTTTCTTCATTTTCCAGGGACAAAGTTGGTGGCGTAAGCCCATGCATTATTGGCTACTGGGTCAGCAACATGGTCGAAG
AGGTTCTCAATTGGGCCTTTCCCAGTAACAATAGCCTGAACAAAGAAACCAAACATGGAGAACATTGCAAGCCTCCCATTCTTGAGTTCCTTAACCTTCA
ATTCTGCGAATGCTTCGGGATCATCAGCCAGTCCAAGTGGGTCAAAGGCACCACCAGGGGTAAATGGGGTCAAGTCCTTCACCGAGTGGTCCTCCACCAA
CTCTGTACCCTTCAATGAAGCCCATAAGCACAACTTGAACAGCCCAAATTGCCAAGATGCTTTGTGCATGAATCAAGTTTGGGTTGCCAAGATAATCAAG
ACCACCCT