Detailed information on CNT30709695


BLAST search results

BLAST vs Swiss-Prot:
sp|P35007|SAHH_CATRO, E-value = 8e-54

BLAST vs NONCODE:
NONBNAT006042, E-value = 3e-65

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675638Glycine maxSetaria viridis47.0131.7892.99157forward
CNT30517189Glycine maxJuglans regia27.5423.6589.1392forward
CNT30702258Glycine maxQuercus lobata29.6421.0685.8699forward
CNT30376640Glycine maxArabidopsis thaliana70.0629.0789.32234forward
CNT30619260Glycine maxSesamum indicum62.2819.5387.02208forward
CNT3020603Glycine maxCitrullus lanatus57.7812.4793.26193forward
CNT3072357Glycine maxQuercus suber70.0622.7891.03234forward
CNT30380227Glycine maxManihot esculenta37.4329.9896125forward
CNT30402445Glycine maxBeta vulgaris60.7845.7288.67203forward
CNT30628366Glycine maxVigna unguiculata27.546.4496.7492forward
CNT30200315Glycine maxPisum sativum54.7935.4787.43183forward
CNT30543653Glycine maxBrassica napus52.9925.6590.96177forward
CNT3076654Glycine maxBrassica juncea47.0133.6287.26157forward
CNT30261371Glycine maxBrassica rapa49.739.7192.77166forward
CNT30612558Glycine maxArabis alpina70.3662.3386.38235forward
CNT30607325Glycine maxGossypium raimondii60.4815.6689.11202forward
CNT30231757Glycine maxAnanas comosus41.3252.4786.23138forward
CNT30651401Glycine maxRosa chinensis26.6533.2193.2689forward
CNT30365203Glycine maxSorghum bicolor16.7726.0587.556forward
CNT30355186Glycine maxLactuca sativa48.822.1585.28163forward
CNT30573685Glycine maxVitis vinifera23.352085.978forward
CNT30705212Glycine maxPrunus avium41.0237.2391.24137forward
CNT3021984Glycine maxPopulus trichocarpa38.325.9892.97128forward
CNT30329805Glycine maxDioscorea rotundata48.227.4390.06161forward
CNT30103876Glycine maxOryza rufipogon46.4134.2292.26155forward
CNT30117878Glycine maxOryza nivara46.4134.4491.61155forward
CNT30723196Glycine maxLupinus angustifolius70.0629.3688.03234forward

Expression of CNT30709695

Peptides detected in this lncRNA

>peptide 1 (42 aa)
AGTLLLPQLKLSNDLVGEGAGHHKTGVSSGASQGRPICQFGA*

>peptide 2 (97 aa)
MTWLVKEQDITKLGCPVAHPKEDPSVSLGLDGDALHAGVVLQPKHVDLIVKVTNVANNGIVLHFPHVVNHDDVLVTGGGDKDISLRNNILQGQNLKAF

>peptide 3 (41 aa)
MLQTMALFFIFLMWSTMMMSLLPVVVTKISASETTSSKVRT*

Sequence

>CNT30709695
TGCCGGTACTCTTCTCCTTCCACAACTCAAGCTGAGCAATGACCTGGTTGGTGAAGGAGCAGGACATCACAAAACTGGGGTGTCCAGTGGCGCATCCCAA
GGAAGACCCATCTGTCAGTTTGGGGCTTGATGGTGATGCGCTTCACGCCGGGGTAGTTCTCCAGCCCAAGCATGTCGATCTCATTGTCAAAGTGACCAAT
GTTGCAAACAATGGCATTGTTCTTCATTTTCCTCATGTGGTCAACCATGATGATGTCCTTGTTACCGGTGGTGGTGACAAAGATATCAGCCTCAGAAACA
ACATCCTCCAAGGTCAGAACCTGAAGGCCTTCCA