Detailed information on CNT30709642


BLAST search results

BLAST vs Swiss-Prot:
sp|O23254|GLYC4_ARATH, E-value = 1e-101

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT304860Glycine maxZea mays10.9830.0784.8886forward

Expression of CNT30709642

Peptides detected in this lncRNA

>peptide 1 (97 aa)
EIINRVLRLPLLRRLGALPVKDHPRTWAPQALVSRGGHNVAILEGAVHFLRGHKAASVRHVAEKQCSALISDFPETFVVPIARVRAATADYEFWPEV*

>peptide 2 (56 aa)
RNHKPRSPAAPSSAAWGPSGKRSSPHVGPASSCESWWSQCRNTRRGCSLPARPQGR*

>peptide 3 (39 aa)
MSQYSKGLFTSCAATRPLVCAMSQRSNAPHLSATSLKRL*

>peptide 4 (50 aa)
MPSEYLFVRALPRASMTAKEVKFSEVMDLGIHRRQGRVTPHAYWIHERWK*

Sequence

>CNT30709642
TCGAAATCATAAACCGCGTTCTCCGGCTGCCCCTTCTTCGGCGGCTTGGGGCCCTTCCGGTAAAAGATCATCCCCGCACGTGGGCCCCGCAAGCTCTTGT
GAGTCGTGGTGGTCACAATGTCGCAATACTCGAAGGGGCTGTTCACTTCCTGCGCGGCCACAAGGCCGCTAGTGTGCGCCATGTCGCAGAGAAGCAATGC
TCCGCACTTATCAGCGACTTCCCTGAAACGTTTGTAGTCCCAATCGCGAGGGTACGCGCTGCCACCGCAGATTATGAGTTTTGGCCTGAAGTCTAGGGCT
TTTTCTTCCAAGCGGTCGTAGTCGATGTAGCCGGTGGTGGAGTTTACCTTGTAAGGGAGACTCTCGAAGTAAATGGAGGTGGCGGAGATCTTCTTTCCGC
CGGAGGTGTAGTAGCCGTGGGTGAGTTGGCCGGGGAGCCGGAGTAGGGCTGGACGTTGACGCCCCAGGATTGGGCGTCGAGGTGGAAGGCTTGGAGGGCG
CGTGAGCGGCAGAGGTTTTCGATCTGGTCGATGTATTCATTGCCGCCGTAGTAGCGGTTGCCCGGCATGCCCTCGGAGTATTTGTTCGTGAGAGCGCTGC
CGAGGGCCTCGATGACGGCGAAGGAGGTGAAGTTCTCGGAGGTCATGGATCTCGGGATCCACCGTCGCCAAGGGCGTGTTACCCCACACGCTTACTGGAT
CCATGAACGGTGGAAATGAATGAATGAGAGTGAGTGAAGAGCGAAAAGCCAAGAGCGAGAAGAGAGAGTGTTGTTGTGTTTGT