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Detailed information on CNT30709610


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3073023Glycine maxQuercus suber6.1225.4786.7668reverse complement
CNT30291456Glycine maxTriticum aestivum5.5825.6290.3262forward
CNT30389136Glycine maxTriticum turgidum5.5830.8590.3262forward
CNT30437581Glycine maxAegilops tauschii5.5820.3390.3262forward
CNT30661738Glycine maxTriticum dicoccoides5.5821.4591.9462forward
CNT30681988Glycine maxTriticum urartu5.5828.4490.3262forward

Expression of CNT30709610

Peptides detected in this lncRNA

>peptide 1 (76 aa)
MSSCKNKQSIIFSCNSTKRVPKKAHKKPKKKIFPEKLNFSKCEATVTQQKSYPPQPLPHLQALPQPQLPPQQDIFR*

>peptide 2 (33 aa)
MINFHMNISCENCVSLFLKVYEILYDLYPNMIK*

>peptide 3 (71 aa)
MAIFTQVKQILKVNLKVNRIELVETHARIKQKTLFFFIKFTKKVPKKPSKTPQKPIKSTCSDFCKAEQRFR*

Sequence

>CNT30709610
CCATGACCTTAACACACCCATCACAAGTCCAAAACACTTGAACTTGCTCAAGGGCAAGAAATGACCACTTTATTCTAAGGGTGTTTGTTTAGACACAAAA
CACCAGAGTGCAACATAATACATACTACATAATTTTGAAGTTTTGAAACTACATATAGTTTTTATCATTATTTCTAAGGGCCATTTCTGCTTGAAGCTTT
AGCTCTCCAACACCTCACTTGCAAGTCTCGGTGGTGGTTGACTCGGTGTAGCTCAAGTCTGGGTACATCTTGCAGCTGCATAACAAGTAGAATAAAGAAA
ACACGGATTAGTGAAATTTACATAACACAATTACACAAAAGCAAAAGAAGATTCTTATGATAAATTTTCACATGAACATCTCATGTGAAAATTGTGTCTC
TCTCTTCTTAAAAGTGTACGAAATTTTATATGATTTATATCCAAACATGATCAAGTGAATTCATATTCAACACACGCCAGTGCTCTCAGAAGAAACATTT
TCCCCCGAGAATAAAAACCTCGGGGTGCTTCTAAAGAAGCACAGGTTAACAAAAAGGGTACCCTAAAACCAAATAAGGAACGAAGCATGGCCATCTTTAC
ACAAGTAAAACAGATCCTCAAAGTGAACCTCAAAGTGAACAGAATTGAACTCGTAGAAACCCATGCAAGAATAAAACAAAAAACATTATTTTTTTTTATA
AAATTTACCAAAAAGGTACCCAAAAAGCCAAGCAAAACACCCCAAAAACCTATAAAATCGACATGTTCTGACTTCTGTAAAGCAGAACAAAGGTTCAGGT
GATCAGAATGTCCTCATGCAAGAATAAACAAAGCATAATTTTTTCATGCAATTCAACCAAAAGGGTACCCAAAAAAGCCCATAAAAAACCCAAGAAGAAA
ATTTTCCCGGAAAAACTCAATTTTTCGAAGTGTGAAGCAACAGTGACACAACAAAAATCTTACCCTCCGCAGCCGTTGCCGCACTTGCAGGCGCTTCCGC
AACCACAGTTACCACCGCAGCAAGACATTTTCAGGTGAGAGAAAAAACAAACACACAAACAACAAAAGAAGAAGATAACGACGAAGAAGAACGAGTCACA
ACAATCACATAC