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Detailed information on CNT30709524


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30706219Glycine maxPrunus avium22.847.7884.09132forward
CNT3052005Glycine maxAmborella trichopoda23.729.9883.21137forward

Expression of CNT30709524

Peptides detected in this lncRNA

>peptide 1 (59 aa)
KVEHTWELPRVELVEINIGDDGDGKGCRSSFSLEVVNHELFIGGVEPKPWRKVWVLRPR*

>peptide 2 (72 aa)
MNNTTLCSIFYRSDNMGLWISGINVCVPMCMQLCNMHDDLRERYLMDEDGFCDTWGGDHTTILRMMRLVLWE*

Sequence

>CNT30709524
TAAAGTAGAGCATACTTGGGAGCTCCCAAGGGTCGAACTTGTAGAGATCAACATCGGCGATGATGGCGACGGGAAGGGGTGCAGAAGCAGCTTTTCTCTT
GAGGTAGTGAACCACGAGCTCTTCATCGGTGGGGTGGAACCGAAACCCTGGAGGAAGGTGTGGGTGCTGAGACCCCGATGATGAATCTCTGCTATCCATG
AACAACACCACTTTGTGCTCAATTTTCTATCGGTCAGATAATATGGGACTTTGGATTTCTGGGATCAATGTATGTGTACCTATGTGTATGCAACTATGTA
ATATGCATGATGATTTAAGAGAAAGGTACCTAATGGATGAGGATGGTTTTTGCGACACATGGGGTGGGGACCACACAACGATATTGAGGATGATGAGGCT
GGTTTTGTGGGAATGAATAAAGGTTGGGGAGTTTAGAAATGAAACGCTTTTGATGTCATGCTTTTCTTATGCAAATAAGCAACCCTCTCACACAAGCCCC
ACATTCAGTTCAGTTTCACAGGTAGGAAGATAGAGATAGATAGAGAGGGTTGATGGGCACGTGAACATGTGCTCTCCC