Detailed information on CNT30709492


BLAST search results

BLAST vs Swiss-Prot:
sp|O04006|PSAH_BRACM, E-value = 3e-22

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30532753Glycine maxEucalyptus grandis15.6829.8487.8474forward
CNT30571627Glycine maxVitis vinifera28.8133.7580.88136forward
CNT30704201Glycine maxPrunus avium23.7343.2488.39112forward
CNT30318832Glycine maxAsparagus officinalis21.194.983100forward
CNT30724007Glycine maxLupinus angustifolius22.8840.389.81108forward

Expression of CNT30709492

Peptides detected in this lncRNA

>peptide 1 (73 aa)
MSPEAVALKYARVEPPPNIRNLSNNPLFGEGASEPYKSHCPVVLPRSSKSKYTLLSPYFATTAPLLGNFQQGH*

>peptide 2 (38 aa)
MQTRKKIIKKELNRWSSDTNQIRSCHEDRALVGVVVPS*

Sequence

>CNT30709492
GGGAAAGAAGCATCTTTGAATAGTAGTCTGTAAGTATACTTACACATTATGCAAACCAGAAAAAAAATAATTAAAAAGGAACTCAATAGATGGAGTTCTG
ATACAAATCAAATTAGATCTTGCCACGAGGACCGAGCTTTGGTGGGAGTTGTGGTCCCTTCTTGATTGGTAGAATGTCACCTGAGGCAGTTGCACTGAAG
TATGCAAGGGTGGAACCACCTCCCAATATCAGAAACTTGAGTAACAATCCCCTCTTTGGTGAAGGTGCATCTGAGCCATACAAGTCCCACTGCCCTGTAG
TGTTGCCCAGATCCTCCAAATCAAAGTACACACTCTTGTCACCATACTTTGCTACCACGGCACCACTCCTAGGGAACTTCCAGCAAGGCCATTGATCGTA
GCTGGTTGAACAGCAGCCAAGGTTGCTAGAGAAGCCATGATCTTCTTTACTTCTAACTTTGTTTCTCTGCTG