Detailed information on CNT30709395


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30171839Glycine maxTrifolium pratense39.2818.8384.4141forward
CNT30144895Glycine maxMedicago truncatula36.7746.6484.85132forward

Expression of CNT30709395

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MPKSLSKFIHSGLHEKDTGLSMSLDTNLVATNCIDDGVVPRVREVQSSRG*

>peptide 2 (52 aa)
MMVLCHGSERCKVQGVKHTTRVSTLMLGQAVLLEDGVLVDRARVLDVLPSPDL

Sequence

>CNT30709395
GTATCATGCTTGATTACTGATTGATGGACAGTCTAAATAACAATGTAAAACCATCGTAGTTCCTCTGTACATGAAAATAGACGGATCATAACAATCATGC
CCAAATCACTCTCAAAATTCATCCATTCAGGATTACACGAGAAGGACACAGGCTTATCCATGTCATTGGATACAAACTTAGTAGCCACGAATTGTATTGA
TGATGGTGTTGTGCCACGGGTCAGAGAGGTGCAAAGTTCAAGGGGTTAAACACACTACCAGGGTATCCACACTCATGTTGGGGCAAGCTGTATTGCTTGA
AGATGGGGTCTTGGTTGACAGAGCCAGGGTTCTTGATGTCCTGCCATCTCCGGATCTCG