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Detailed information on CNT30709372


BLAST search results

BLAST vs Swiss-Prot:
sp|O48561|CATA4_SOYBN, E-value = 2e-65

BLAST vs NONCODE:
NONGMAT001767, E-value = 3e-115

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30405511Glycine maxBeta vulgaris25.075.1484.2789forward

Expression of CNT30709372

Peptides detected in this lncRNA

>peptide 1 (39 aa)
GLPVKFHIHCFPSLVDQRICVNSKTIHMPVILWNTQIIK*

Sequence

>CNT30709372
GGTCTTCCAGTGAAATTTCACATACACTGCTTTCCCAGCCTTGTTGATCAGCGTATATGTGTTAACTCCAAAACCATCCATATGCCTGTAATCTTGTGGA
ACACCCAAATCATCAAATAAAAAGGTGAACATGTGAAGGCTTTCTGGAAAGTGAGAGAAGAAGTCAAGGATCCTCCAATTCTCTTGGATGTGGTTCTTGG
GATTGGGTTTCAGGGCTACCACGCTCATGAATGACAGTTGAGAAACGAACAATTACAGGCGTCTGAACTCCAGGGGCTCGAAGGAAATCTGCACATGTCA
GGTGAGAAATGTCATGTGTGACCTCAAAGAAACCCTTTGCACTAGCTCCCCTGGC