Detailed information on CNT30709260


BLAST search results

BLAST vs Swiss-Prot:
sp|O48561|CATA4_SOYBN, E-value = 4e-59

BLAST vs NONCODE:
NONGMAT001767, E-value = 2e-136

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30377107Glycine maxArabidopsis thaliana61.8934.6781.1164forward
CNT30295853Glycine maxTriticum aestivum207.8988.6853forward

Expression of CNT30709260

Peptides detected in this lncRNA

>peptide 1 (39 aa)
GLPVKFHIHCFPSLVDQRICVNSKTIHMPVILWNTQIIK*

Sequence

>CNT30709260
GGTCTTCCAGTGAAATTTCACATACACTGCTTTCCCAGCCTTGTTGATCAGCGTATATGTGTTAACTCCAAAACCATCCATATGCCTGTAATCTTGTGGA
ACACCCAAATCATCAAATAAAAAGGTGAACATGTGAAGGCTTTCTGGAAAGTGAGAGAAGAAGTCAAGGATCCTCCAATTCTCTTGGATGTGGTTCTTGG
GATTGGGTTTAAGAGCATGAACCATATCTGGAAATTTCATGCCGTTGTTTCCAACAAGGTCAAAG