Detailed information on CNT30709197


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30727608Glycine maxCorchorus capsularis8.821.1386.5982forward

Expression of CNT30709197

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MKAKLRGKTQILCRPITETINIYEDPLCVKV*

>peptide 2 (40 aa)
MINIYFIKKNRHSFIKNNIFYYIQNIFSYKYKTLLVRFNV*

>peptide 3 (34 aa)
MLGACCTRYGIATGQYARVHASHVWMDARFVRVK*

>peptide 4 (29 aa)
MGLGRLHQKTTSKLREGVDYTLLALLLSR*

>peptide 5 (59 aa)
MIPALAEELEAAEMKRVAAKRTRAPLLPSDSLALGTLASHLINARSMLHQIWHSYRPIR*

>peptide 6 (61 aa)
LLSPFPENIRTALVFTFCLARSWQPVKFSGNLQLPNSTVYALAKFAPVVANLFLSFNSYST*

Sequence

>CNT30709197
CCTCCTTTCACCATTTCCAGAAAACATTAGAACCGCACTTGTATTTACCTTTTGTTTGGCAAGATCTTGGCAACCAGTGAAGTTCTCAGGGAACTTGCAA
CTACCGAATTCCACGGTGTATGCTCTTGCAAAGTTTGCTCCAGTAGTAGCTAACCTCTTCTTGTCATTCAATTCCTATAGCACATAAACTAGTCTACATT
ATGAAGGCAAAATTAAGGGGAAAAACCCAAATCTTATGCAGGCCAATCACAGAAACAATCAATATATATGAGGATCCTTTGTGTGTAAAAGTATGATAAA
TATATATTTCATAAAAAAAAATAGACACAGTTTTATTAAAAATAATATATTTTATTACATACAAAATATTTTTTCATACAAATATAAAACATTACTTGTT
AGGTTTAATGTTTGAAAAGTTAAAATTTAAAAATTAAAGAAGTTTTAAAAAAGTCAACTAGATAAAGTTGTGCTAAAAGAAATTGAATTTCTTGTTCTCC
TTACACTATAGTTGTTTGAATTTTCTTTTGGATCCCCTTCGGCCATGGGCCTCGGGCGGTTGCACCAGAAAACAACCTCAAAATTAAGAGAAGGGGTTGA
TTATACCTTGTTAGCCTTGCTCCTCTCAAGGTAATCATCAATGATCCCAGCATTGGCAGAAGAATTGGAGGCTGCAGAGATGAAAAGGGTAGCTGCCAAG
AGAACAAGGGCACCTCTCCTTCCTTCAGATTCTTTGGCTTTGGGAACTCTGGCCTCACATTTGATCAATGCTCGGAGCATGCTGCACCAGATATGGCATA
GCTACAGGCCAATACGCTAGAGTTCATGCCAGCCATGTGTGGATGGATGCAAGGTTTGTGAGAGTCAAATGAACTTACTTTGCAAGGCCTAAGCTTCGTG
GGTTGTTATTGTTAGTATTAGTATTATTTTTT