Detailed information on CNT30709157


BLAST search results

BLAST vs Swiss-Prot:
sp|O23254|GLYC4_ARATH, E-value = 1e-137

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697365Glycine maxOryza sativa19.4946.2489.43123forward
CNT30677245Glycine maxSetaria viridis10.463090.9166forward
CNT30524209Glycine maxSetaria italica48.0216.3388.12303forward
CNT30617858Glycine maxSesamum indicum14.4226.2284.6291forward
CNT3070360Glycine maxQuercus suber26.4758.686.23167forward
CNT30179070Glycine maxSecale cereale28.5336.6686.67180forward
CNT30558965Glycine maxActinidia chinensis32.1760.4287.19203forward
CNT30237993Glycine maxBrassica oleracea35.0244.9285.07221forward
CNT30248419Glycine maxAvena sativa21.3929.886.67135forward
CNT30714749Glycine maxMalus domestica golden32.0187.0785.64202forward
CNT30365509Glycine maxSorghum bicolor40.5737.4887.11256forward
CNT30117918Glycine maxOryza nivara38.5127.0386.42243forward

Expression of CNT30709157

Peptides detected in this lncRNA

>peptide 1 (53 aa)
ARGPRKLLCVVVVTMSQYSKGLFTSCAATRPLVCAMSQRSNAPHLSAISLKRL*

>peptide 2 (73 aa)
RPWTPQALMRGGGHNVAILEGAVHFLRGHKAASVRHVAEKQCPALIRNFPEAFVVPIARVSAATADYQFGPEV*

>peptide 3 (30 aa)
MPSEYLLVRALPRASMTAKEVKFSEAMSSMP

>peptide 4 (31 aa)
PVDPASSYAWWWSQCRNTRRGCSLPARPQGR*

Sequence

>CNT30709157
CGCCCGTGGACCCCGCAAGCTCTTATGCGTGGTGGTGGTCACAATGTCGCAATACTCGAAGGGGCTGTTCACTTCCTGCGCGGCCACAAGGCCGCTAGTG
TGCGCCATGTCGCAGAGAAGCAATGCCCCGCACTTATCCGCAATTTCCCTGAAGCGTTTGTAGTCCCAATCGCGAGGGTAAGCGCTGCCACCGCAGATTA
TCAATTTGGGCCTGAAGTCTAGGGCTTTTTCCTCCAAGCGGTCGTAGTCGATGTAGCCGGTGGTGGAGTTTACTTTGTAAGGGAGGCTCTCGAAGTAAAT
GGAGGTGTAGTAGCCGTGGGTGAGGTGGCCGCCGGAGGGGAGATCCAGCCCCATGATGCGGTCGTGGGGGTTGAGGACGGCGGTGTAGGCGGCGAAGTTG
GCAGGGGAGCCGGAGTAGGGCTGCACATTGACGCCCCAGGATTGGGCGTCGAGGTGGAAGGCCTGGAGGGCGCGTGAGCGGCAGAGGTTTTCGATCTGGT
CGATGAATTCGTTGCCGCCGTAGTAGCGGTTGCCGGGCATGCCCTCGGAGTATTTGTTGGTGAGGGCGCTGCCGAGGGCCTCGATGACTGCGAAGGAGGT
GAAGTTCTCGGAGGCGATGAGCTCGATGCCG