Detailed information on CNT30709121


BLAST search results

BLAST vs Swiss-Prot:
sp|P25698|EF1A_SOYBN, E-value = 3e-87

BLAST vs NONCODE:
NONGMAT001702, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672466Glycine maxSetaria viridis41.446.3789.76166forward
CNT30520930Glycine maxSetaria italica41.460.8186.75166forward
CNT30378189Glycine maxArabidopsis thaliana41.440.1987.35166forward
CNT30224124Glycine maxHordeum vulgare37.6650.8486.09151forward
CNT30590647Glycine maxMusa acuminata24.6931.7389.999forward
CNT3084119Glycine maxVigna radiata104.9923.6588.6421forward
CNT30509848Glycine maxSolanum lycopersicum40.6570.8788.34163forward
CNT30450104Glycine maxSaccharum spontaneum22.9422.0688.0492forward
CNT30625732Glycine maxDaucus carota32.1760.2884.5129forward
CNT30689637Glycine maxTriticum urartu102.9942.3284.02413forward
CNT30338600Glycine maxEragrostis tef102.9986.0482.81413forward
CNT30362246Glycine maxSorghum bicolor56.8641.3887.72228forward
CNT30483063Glycine maxChara braunii20.736.7385.5483forward
CNT30704438Glycine maxPrunus avium31.6752.784.25127forward
CNT3053086Glycine maxAmborella trichopoda20.212.7887.6581forward
CNT30101083Glycine maxOryza rufipogon102.9977.3481.36413forward
CNT30116334Glycine maxOryza nivara102.9967.781.6413forward
CNT30726402Glycine maxLupinus angustifolius100.2584.2885.07402forward

Expression of CNT30709121

Peptides detected in this lncRNA

>peptide 1 (54 aa)
ESRACSRVCPSFEIPASKPPVVESMIRTAQSAWDVPVIMFLMKSLCPGASMTVQ*

Sequence

>CNT30709121
ATGAAAGCAGAGCATGTTCACGAGTCTGTCCATCCTTTGAAATTCCAGCTTCAAAACCACCAGTAGTGGAATCAATGATAAGAACAGCACAGTCAGCTTG
GGATGTCCCAGTGATCATGTTCTTGATGAAATCCCTGTGTCCAGGGGCATCAATGACTGTGCAATAGTACTTGGCAATATCAATTGTGATTCCTCTTTCA
CGCTCAGCCTTAAGCTTATCAAGCACCCAGGCATACTTGAAAGACCTCTTGTTCATCTCAGCAGCTTCCTTCTCAAATCTCTCAATAACACGCTTGTCAA
TGCCTCCAAGCTTGTAGATCAGGTGGCCAGTGGTAGTGGACTTCCCAGAGTCAACATGGCCAATAACCACAATACTGATGTGAACCTTTTCCTTACCCAT
C