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Detailed information on CNT30709047

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30378677	Glycine max	Arabidopsis thaliana	62.56	23.72	82.62	650	forward
CNT30619453	Glycine max	Sesamum indicum	32.15	47.85	85.33	334	forward
CNT3088309	Glycine max	Vigna radiata	24.16	31.26	93.23	251	forward
CNT30605197	Glycine max	Gossypium raimondii	34.26	42.79	90.45	356	forward
CNT30229163	Glycine max	Ananas comosus	5.77	27.91	86.67	60	forward
CNT3055613	Glycine max	Amborella trichopoda	16.27	41.02	91.72	169	forward

Expression of CNT30709047

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MIFICVGFSNETKHFFFFIIQKAQSHTLTSMIGTTSALRRSNEKQFSA*

>peptide 2 (29 aa)
MLIHEKRYEKFERTHIRNEGDPWKYIGFLL

>peptide 3 (34 aa)
MLCSRSRVDIISKSTTLYVVYVWEAYLTGDRHRR*

>peptide 4 (41 aa)
RFFKKRESLVPHFFLFPIITTLVPPPFFHFGALLKNKNPLL*

Sequence

>CNT30709047
TAGGTTCTTTAAGAAGAGAGAATCATTGGTTCCTCATTTTTTTCTCTTTCCTATCATAACAACTCTGGTTCCCCCACCTTTTTTTCATTTTGGGGCCCTA
CTTAAAAATAAGAATCCATTATTGTAAGTAAGCCCCCCTTTTGCCTTGAAAGAATTTGGTTTCGTTGCACCCTGAATCAATCAAAAAGCTTCTCTTTTTT
TTAATTCATCCCATTTTATTTGGGCGAGAGGGAGGTTGTGAGTCACCTGGGCTACGGATTTTTCGGTTGGTTGATTCTCGAAATCACCTCTTGAGAAAAA
AAAGGGGGGAAAAGAGGGGTGAGGCTTTGTTCTGGGGGTGGGGCCGCCTTGCGCAGCTTTAGAAAGGAGAGATTTTCAAAAGTCACTCTCTCCAACCTTT
TCTATCTATCCTTAGAAGTTGGGCGAGATAAAGTAAATATGATATTTATTTGCGTTGGTTTTTCCAACGAAACTAAGCACTTTTTTTTCTTTATCATTCA
GAAGGCTCAGTCCCACACTCTGACTTCCATGATAGGAACAACCTCTGCACTCCGGCGCTCCAATGAAAAACAGTTCTCCGCCTGACTTTATTTAGATTAG
AATAGTGGTCGATCCCTCGGGAGTTACATTTGTAACTTAATGTTATGTTCACGTTCACGCGTTGATATTATATCCAAGAGTACTACCCTATATGTAGTCT
ATGTCTGGGAAGCATACTTGACAGGAGATAGACACAGGCGGTAGACAGGTCCCCCACTTCAATTCCAGCCCCGTTAGCATAGCATCTCCGATCCGAGATA
AGGGATTACTCCATTAGGTCTGTTCGGAGTCAGCCGGTAATGAACCTACTTACCTTGCTTGTGGACCAGCTGCAGAGCTAACCCTTGTTCTATTGGTTTG
GCAGTTGCTACCAAGACGATTTCTTTATGCCCATCAAAGGACCTCGAGATGCTAATCCATGAAAAACGATACGAGAAATTCGAAAGAACTCATATACGGA
ATGAGGGCGACCCGTGGAAATACATCGGTTTCTTACTCG