CANTATAdb - search

Detailed information on CNT30709036

BLAST search results

BLAST vs Swiss-Prot:
sp|P08222|CB22_CUCSA, E-value = 9e-70

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30380492	Glycine max	Manihot esculenta	39.1	34.29	87.65	251	forward
CNT30504488	Glycine max	Nicotiana attenuata	48.29	64.32	86.77	310	forward
CNT3046620	Glycine max	Prunus dulcis	42.68	44.55	84.67	274	forward
CNT30171214	Glycine max	Trifolium pratense	48.6	29.55	83.65	312	forward
CNT30572261	Glycine max	Vitis vinifera	36.45	28.61	85.9	234	forward

Expression of CNT30709036

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MLTLPTSGADGPSFTALPAKDGEERAMEEAAAIFKTLG*

>peptide 2 (32 aa)
MANLPFLSSFTLSSAKASGSSARPNGSKLPPG*

Sequence

>CNT30709036
GACACTTGAGTTTTCGTAAAAAGCAAGTAACATTAAGTTGGATTCGGATACACAAGATAATTCACATTATCTGAAGTACATTGCAATAACATATACTTCA
CCAAACACAAATCTAAAAACTCTCAAAAGTCCACAAGTCATCCTTTTCTTTCATGCTCACTTGCCGGGGACGAAGTTGGTGGCGTAGGCCCAGGCATTGT
TGTTGACTGGGTCCGCAAGGTGATCAGCAAGGTTCTCCAATGGACCCTTACCGGTGACAATGGCCTGAACAAAGAACCCAAACATAGAGAACATGGCCAA
TCTCCCGTTCTTGAGTTCCTTCACCTTAAGCTCAGCAAAAGCCTCTGGGTCATCAGCAAGGCCCAATGGGTCAAAGCTGCCACCAGGGTAGATTGGGTCA
GTGACCTCACCGAGGGGCCCACCAGCAATACGATAACCCTCAACAGCACCCATTAGGATAACTTGGGAGGCCTGCTTGGTGACGGTCTTCCTCATGCTGA
CCCTCCCGACTTCGGGGGCTGATGGGCCCAGCTTCACGGCCTTGCCAGCCAAGGATGGGGAAGAGAGAGCCATGGAGGAGGCTGCTGCCATTTTTAAAAC
TCTAGGATGAGCTTGCTTTCTGCCTTGTGTTATGGAGTTGTG