CANTATAdb - search

Detailed information on CNT30709031

BLAST search results

BLAST vs Swiss-Prot:
sp|P16148|PLZ12_LUPPO, E-value = 5e-40

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30531529	Glycine max	Eucalyptus grandis	30.96	91.48	81.68	322	forward
CNT30401917	Glycine max	Beta vulgaris	16.06	40.24	82.04	167	forward
CNT30194604	Glycine max	Pisum sativum	10.67	29.84	82.88	111	forward
CNT30145478	Glycine max	Medicago truncatula	19.9	48.59	88.89	207	forward
CNT30441068	Glycine max	Aegilops tauschii	14.04	29.55	80.14	146	forward
CNT3075659	Glycine max	Brassica juncea	14.33	41.27	82.55	149	forward
CNT30352560	Glycine max	Eragrostis tef	12.69	24.04	81.82	132	forward

Expression of CNT30709031

Peptides detected in this lncRNA

>peptide 1 (55 aa)
MNEVESTKYTHQPVKPLKVIMVQVGTQEPWRVSKSTSHLIDGGHKNSAEEVPHGQ*

>peptide 2 (30 aa)
MRSLKKFLTNLTSYITNSTRSVWNEHRRRL*

>peptide 3 (35 aa)
MVDTRTVLRKYPMASEAHESAVAKDLMLHGASVKKN

>peptide 4 (46 aa)
MIFGGSILQFIPKQNHKTQCTEQKYRCYNFTILQYKPNTRSRWSRG*

Sequence

>CNT30709031
AAAACTTTAAATTTTATCGCATGACCTCATCCCCACCATGAATTTTATCTCATGACTTCATCCCCGCTTAGAAATCGTAAAATCTTATAATAATTTCATC
AATTCATTCTATTTTTCCTTTTTCGAAGATAAACTGATATGGGCTGTCGGTGTTTCCGATTACGCAGCTTGATGGTTTGAGTGACGGCTTGTGAACTTGT
ATTATTAATGAGGTGATGCCATGATCTTTGGAGGATCAATTTTGCAGTTTATTCCAAAACAAAATCACAAAACACAGTGCACAGAACAGAAGTACAGGTG
CTATAACTTCACCATACTCCAATACAAACCAAACACAAGATCAAGGTGGAGTAGAGGCTAGATGAGAAGCCTGAAGAAGTTCCTCACGAATTTGACCAGC
TACATCACGAACAGCACCAGGTCCGTGTGGAATGAACACAGGAGAAGACTTTGAGGCAGCACCAATTTCTTTCATGGTGTCAAAATACTGAGTGGCAAGG
ACCATATCCATGACATCTTTTGCAGTTGTCCCAGGCACATTAACTGAGAATCCAAACACACTATCTCTCAAGCCATCTACAATTGCTTGACGTTAGCGAG
CAATACCCAGCCCAGAAAGATACTTAGACTCAGCCTCACCCTCGGCTCATTTAATTAGCAAGATCTTCTCTGCCTCTGCCTTCTCATAATTAGCTGCCAC
CATCAATCTTGCAGCTGATAAAGGGCAAAAAGCAAAGGAAAAAAAAGTCAATCCATGATCAAAGGAAAGATCACTCGGCAGAGGAACAAGGAATTGGCCC
AGAAGAGAAAATGAACGAAGTTGAGTCCACTAAGTACACACATCAACCAGTAAAACCTCTCAAGGTGATAATGGTTCAAGTTGGCACCCAAGAGCCATGG
CGTGTGTCCAAAAGCACCAGTCACCTTATTGATGGTGGACACAAGAACAGTGCTGAGGAAGTACCCCATGGCCAGTGAGGCCCATGAAAGTGCTGTGGCC
AAAGACCTCATGCTCCATGGTGCCTCTGTGAAGAAGAACT