Detailed information on CNT30709030


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618064Glycine maxSesamum indicum41.5766.5580185forward
CNT30728738Glycine maxCorchorus capsularis23.3716.287.5104forward
CNT30301323Glycine maxTriticum aestivum27.872589.52124forward
CNT3086406Glycine maxVigna radiata53.7110.1484.52239forward
CNT30650814Glycine maxRosa chinensis25.3939.190.27113forward
CNT30344011Glycine maxEragrostis tef49.8914.5382.88222forward
CNT30364601Glycine maxSorghum bicolor18.8830.8885.7184forward
CNT30575210Glycine maxOryza barthii22.713.2988.12101forward
CNT30592968Glycine maxEragrostis curvula25.6215.7988.6114forward

Expression of CNT30709030

Peptides detected in this lncRNA

>peptide 1 (93 aa)
MRRALRWLFMMDFWWRRCSDGVQESASQLGRVSYFQYMSMRRNRQKGTTERNGFSRFRVTATRPFRRASSPGMVRRMTIMASAAAAYPSTTHSS

Sequence

>CNT30709030
CGGGCATTCTCACGTCAATAAACAGCAATAACAACAAATCATAACAATGCGCAAAATCAAAGTAGCACTCAACAATAATCGAAACGGTGTTTTGCTATGA
TATAAGAGAACGACGAGGTTGGTGACGGAGTAGAGGAGCCAGTAGAAGAGGAGAGCGGCGGCGATGAGGAGGGCGTTGCGCTGGCTCTTCATGATGGATT
TCTGGTGGCGAAGGTGCTCCGACGGGGTGCAGGAATCTGCCTCACAACTTGGACGAGTCTCGTACTTCCAATATATGTCCATGAGAAGGAACAGACAGAA
GGGAACAACCGAGAGGAACGGCTTCAGCAGGTTCCGGGTCACAGCGACCAGACCCTTTCGGAGAGCGTCCAGCCCCGGGATGGTCAGGAGAATGACCATT
ATGGCCTCTGCGGCCGCGGCGTACCCTAGCACAACCCACTCTAGC