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Detailed information on CNT30709007

BLAST search results

BLAST vs Swiss-Prot:
sp|Q71T45|H32_EUPES, E-value = 2e-44

BLAST vs NONCODE:
NONBRAT001321, E-value = 1e-36

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30674990	Glycine max	Setaria viridis	25.63	15.29	88.52	61	forward
CNT30521250	Glycine max	Setaria italica	68.07	43.43	85.19	162	forward
CNT30315797	Glycine max	Corylus avellana	77.73	27.99	84.86	185	forward
CNT30547549	Glycine max	Ipomoea triloba	85.29	26.23	85.71	203	forward
CNT30698329	Glycine max	Quercus lobata	84.87	42.8	90.59	202	forward
CNT30267640	Glycine max	Chenopodium quinoa	84.03	27.55	80.5	200	forward
CNT3069241	Glycine max	Quercus suber	87.39	47.27	88.94	208	forward
CNT30380641	Glycine max	Manihot esculenta	77.73	26.77	85.41	185	forward
CNT30200890	Glycine max	Pisum sativum	84.03	32.52	87	200	forward
CNT3048083	Glycine max	Prunus dulcis	86.97	29.49	88.41	207	forward
CNT30168718	Glycine max	Pistacia vera	40.76	6.34	83.51	97	forward
CNT3090157	Glycine max	Solanum tuberosum	71.85	26.51	81.29	171	forward
CNT30177168	Glycine max	Secale cereale	76.89	24.63	81.97	183	forward
CNT30283601	Glycine max	Triticum aestivum	71.43	26.36	82.94	170	forward
CNT30398097	Glycine max	Triticum turgidum	72.69	22.61	86.71	173	forward
CNT30565750	Glycine max	Actinidia chinensis	80.67	17.47	86.98	192	forward
CNT30591253	Glycine max	Musa acuminata	43.28	33.01	83.5	103	forward
CNT3084857	Glycine max	Vigna radiata	86.97	16.86	86.96	207	forward
CNT30508643	Glycine max	Solanum lycopersicum	71.85	22.24	82.46	171	forward
CNT30441386	Glycine max	Aegilops tauschii	72.69	36.04	85.55	173	forward
CNT30254117	Glycine max	Avena sativa	77.73	34.32	84.86	185	forward
CNT30655661	Glycine max	Triticum dicoccoides	71.43	31.42	82.35	170	forward
CNT30309861	Glycine max	Camelina sativa	77.31	29.68	82.61	184	forward
CNT30259840	Glycine max	Brassica rapa	88.24	72.66	85.24	210	forward
CNT30613891	Glycine max	Arabis alpina	63.45	37.47	84.77	151	forward
CNT30474628	Glycine max	Saccharum spontaneum	41.18	8.24	87.76	98	forward
CNT30141394	Glycine max	Lolium perenne	83.19	30.89	83.84	198	forward
CNT306284	Glycine max	Zea mays	25.63	28.5	90.16	61	forward
CNT30610039	Glycine max	Gossypium raimondii	84.03	22.73	85	200	forward
CNT30720909	Glycine max	Triticum spelta	71.43	26.03	84.12	170	forward
CNT30477972	Glycine max	Arabidopsis halleri	82.77	56.94	81.73	197	forward
CNT30368649	Glycine max	Sorghum bicolor	77.73	44.05	85.95	185	forward
CNT30622400	Glycine max	Cajanus cajan	88.24	22.95	84.76	210	forward
CNT30596421	Glycine max	Oryza meridionalis	49.58	16.81	84.75	118	forward
CNT30358481	Glycine max	Lactuca sativa	72.69	18.89	86.71	173	forward
CNT30414942	Glycine max	Papaver somniferum	88.24	25.83	82.38	210	forward
CNT30644610	Glycine max	Cannabis sativa	71.43	36.96	84.71	170	forward
CNT3053477	Glycine max	Amborella trichopoda	79.41	30.19	84.13	189	forward
CNT30148402	Glycine max	Brachypodium distachyon	49.58	24.03	85.59	118	forward
CNT3099660	Glycine max	Oryza rufipogon	25.63	13.47	88.52	61	forward
CNT30585391	Glycine max	Echinochloa crusgalli	71.43	26.11	84.71	170	forward
CNT3051266	Glycine max	Cucumis sativus	72.69	23.07	81.5	173	forward
CNT3018856	Glycine max	Cyanidioschyzon merolae	44.12	45.65	83.81	105	forward

Expression of CNT30709007

Peptides detected in this lncRNA

>peptide 1 (73 aa)
TLKRKLSDQKLRALLVLSDLPQGHCSRPEPVRLLHSAGRRSRLPSGLRRQLLPGSLAAGGLASSLLCTRHLEE*

Sequence

>CNT30709007
ACGCTGAAACGGAAGCTTTCGGATCAGAAGCTCCGTGCTCTTCTGGTACTTTCTGATCTCCCTCAGGGCCACTGTTCCAGGCCTGAACCTGTGCGGCTTC
TTCACTCCGCCGGTCGCCGGAGCAGACTTCCGAGCGGCCTTCGTCGCCAGCTGCTTCCGGGGAGCCTTGCCGCCGGTGGACTTGCGAGCAGTTTGCTTTG
TACGCGCCATCTGGAAGAGTGACCTAACTTGGAAGTTG