Detailed information on CNT30708950


BLAST search results

BLAST vs Swiss-Prot:
sp|Q01517|ALFC2_PEA, E-value = 6e-29

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30237226Glycine maxBrassica oleracea21.518.3286.7583forward
CNT30439071Glycine maxAegilops tauschii25.1329.0484.5497forward
CNT30255936Glycine maxAvena sativa24.0925.2782.893forward
CNT30217689Glycine maxKalanchoe fedtschenkoi17.12289.3966forward
CNT30319836Glycine maxAsparagus officinalis32.1215.5483.87124forward

Expression of CNT30708950

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MCGKMILVGVTFDEHSPSGFLRFTLGSVLSKLSESAS*

Sequence

>CNT30708950
TTGGCTAGAAGTTCATTAAGTAGAAAAGGTACAAGTAATAATCATCATTAAAAATAGTGTCCAAGACTATATAAACCACAAACACAATTTAGACAAATTA
ATGTTGGATCCTTGGGTTACTGTAGCATGTGTGGCAAGATGATCTTAGTAGGAGTAACCTTTGACGAACATTCCCCGAGTGGCTTCCTCAGATTCACCCT
CGGCAGTGTACTTTCCAAGCTGAGCGAGAGTGCATCTTGAGCAGCCTTCACGTTCTCAGGGAGTCCACCCCATGTCTTCAAGCAGGTGTTTTGGAGAGCT
CTGGCGTAGGAGAAGGACACGTGCCATGGGTTTGGAGACTGGTTCATAGCATTCAAGTTCAAGGTTGCTTCAACCTCAGATTGTCC