Detailed information on CNT30708916


BLAST search results

BLAST vs Swiss-Prot:
sp|Q01517|ALFC2_PEA, E-value = 2e-37

BLAST vs NONCODE:
NONMEST001145, E-value = 9e-28

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30524374Glycine maxSetaria italica45.6411.1382.73110forward
CNT30727836Glycine maxCorchorus capsularis78.0150.5485.11188forward
CNT30494492Glycine maxOlea europaea54.7726.2483.33132forward
CNT30145300Glycine maxMedicago truncatula80.0888.5387.56193forward
CNT30662744Glycine maxTriticum dicoccoides37.7617.0484.6291forward
CNT30462400Glycine maxSaccharum spontaneum63.0711.1780.92152forward
CNT307142Glycine maxZea mays53.1110.2282.03128forward
CNT30610723Glycine maxGossypium raimondii78.0136.4388.3188forward
CNT30345066Glycine maxEragrostis tef63.0727.5482.89152forward
CNT30581883Glycine maxEchinochloa crusgalli39.4216.7384.2195forward

Expression of CNT30708916

Peptides detected in this lncRNA

>peptide 1 (79 aa)
LYKPQTQFRQINVGSLVGLGTEKECILSSLHVLRESTPCLQAGVLESSGVGEGHVPWVWRLVHSIQVQGCFNLRLSARQK

Sequence

>CNT30708916
CTATATAAACCACAAACACAATTTAGACAAATTAATGTTGGATCCTTGGTTGGACTTGGCACGGAAAAGGAGTGCATCTTGAGCAGCCTTCACGTTCTCA
GGGAGTCCACCCCATGTCTTCAAGCAGGTGTTTTGGAGAGCTCTGGCGTAGGAGAAGGACACGTGCCATGGGTTTGGAGACTGGTTCATAGCATTCAAGT
TCAAGGTTGCTTCAACCTCAGATTGTCCGCCAGACAGAAAC