Detailed information on CNT30708912


BLAST search results

BLAST vs Swiss-Prot:
sp|O48561|CATA4_SOYBN, E-value = 9e-171

BLAST vs NONCODE:
NONGMAT001767, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30501026Glycine maxCoffea canephora2413.6983.25209forward
CNT30281430Glycine maxChenopodium quinoa26.2930.0984.72229forward
CNT3021611Glycine maxCitrullus lanatus21.9348.1185.34191forward
CNT3070085Glycine maxQuercus suber67.9790.879.05592forward
CNT30380803Glycine maxManihot esculenta13.6625.3782.35119forward
CNT30526368Glycine maxPhaseolus vulgaris34.5618.9195.02301forward
CNT3046375Glycine maxPrunus dulcis31.2338.9785.29272forward
CNT3085325Glycine maxVigna radiata30.8838.0594.42269forward
CNT30313019Glycine maxCamelina sativa16.8824.0280.95147forward
CNT30263082Glycine maxBrassica rapa31.1180.982.66271forward
CNT30475173Glycine maxSaccharum spontaneum27.3232.0379.83238forward
CNT30654455Glycine maxRosa chinensis33.0763.0282.29288forward
CNT30715065Glycine maxMalus domestica golden46.8428.6981.62408forward
CNT30624536Glycine maxDaucus carota22.2713.8184.54194forward
CNT30154060Glycine maxPrunus persica38.4633.3782.69335forward
CNT30574555Glycine maxVitis vinifera38.4640.5179.4335forward
CNT30704833Glycine maxPrunus avium3137.8284.44270forward
CNT3022395Glycine maxPopulus trichocarpa24.9152.886.18217forward
CNT3038372Glycine maxCucumis melo43.9734.8280.94383forward

Expression of CNT30708912

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MAGQNASCSFSAKKLSMFLFRTKRPTGCKGIMSSGSIV*

Sequence

>CNT30708912
TTGCAGAGCTCAGTCACAAGAAAAAAATGTGAATACTGAATAATGACAAAAGAATAGGCAGCAATATTACCCAATCAGCATGTGCATGAATAATCTAACA
GCACTAAGTAGTTAACAAGGCAACCAGATTTTCAAACAGAAAACAAATAAGAAAATATAAGAAATTAAACATTAACTTACCTCCTCATCCCTGTGAATGA
AATTCATGAAACCTTCATGATGATTATTGTGGTGAGCACACTTGGGAGCATTAGCAGGAAGTTGCAGATAGTTTGGTCCAAGTCTGTGCCTTTGTGAATC
AGCATAAGAGAATATCCTGGTCTGAAGCATCTTATCATCTGAGTAGTATACACCAGGAACCACAATGGCAGGGCAAAATGCAAGTTGTTCATTCTCAGCA
AAGAAATTATCTATGTTTTTATTCAGGACCAAGCGACCAACAGGCTGCAAGGGTATAATGTCCTCAGGATCTATTGTCTGAACGAACAGTTTCCACTCAG
GATAGTTACCAGCAGCAATTGAATCATGAAGGTCTTGAGTGGCATGGCTGTGGTTGGCTCCTCCCACCTTAATGGCCTCTTCCTCCAATAGACACTTTAT
ACCACTAGTGGTCTTCCAGTGAAATTTCACATACACTGCTTTCCCAGCCTTGTTGATCAGTGTGTATGTGTTAACTCCAAAACCATCCATATGCCTGTAA
TCTTGTGGAACACCCAAATCATCAAATAAAAAGGTGAACATGTGAAGGCTTTCTGGAAAGTGAGAGAAGAAGTCAAGGATCCTCCAATTCTCCTGGATGT
GGTTCTTGGGATTGGGTTTAAGAGCATGAACCATATCTGGAAACTTCATGCCATCACGTACAAAGAAGACG