Detailed information on CNT30708893


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SK39|SBP3_ARATH, E-value = 4e-54

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30516768Glycine maxJuglans regia73.721.3986.57283forward
CNT30654037Glycine maxRosa chinensis67.4566.9385.71259forward
CNT30364531Glycine maxSorghum bicolor16.672085.9464forward

Expression of CNT30708893

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MPLTTGYLAWNLFSQSLRTPISLSERPSREGEMSSSFLLIFARALLASLPANMA*

>peptide 2 (31 aa)
MGPCRCIGSAAGVSAPLSFAALMRRGEMSDRT

Sequence

>CNT30708893
ATTAGGGATTAAAGGGTGATTGAGTTCGGTTACAGAAAGAGATCATGCCACTCACGACAGGGTACTTAGCTTGGAATTTGTTCTCCCAGTCGTTGAGAAC
GCCGATCTCCTTGTCGGAGAGGCCGTCGAGGGAGGGGGAGATGTCGTCGTCGTTCTTGCTCATCTTCGCCAGGGCTCTGCTGGCGTCTTTGCCGGCGAAC
ATGGCGTAGGGGCCGCCGGGGCCGTAAAAGGATTTTCCGGTGGTGACGTCGTAGACGCGGCCCTTCACCGCCACGTAGATCGGCTTCGATGGGTCCGTGC
CGTTGTATTGGCTCAGCTGCTGGGGTGTCAGCTCCATTGTCTTTCGCAGCGTTGATGAGAAGAGGTGAGATGAGTGATCGCACA