Detailed information on CNT30708793


BLAST search results

BLAST vs Swiss-Prot:
sp|Q01517|ALFC2_PEA, E-value = 4e-35

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30381337Glycine maxManihot esculenta61.3916.0181.96194forward
CNT30632098Glycine maxVigna unguiculata40.8217.3489.15129forward
CNT30355284Glycine maxLactuca sativa22.4710.187.3271forward
CNT3029174Glycine maxTheobroma cacao51.5816.2580.37163forward

Expression of CNT30708793

Peptides detected in this lncRNA

>peptide 1 (42 aa)
GNNVLVNKYVDDLPSIDSGLVESFLKENGTRDVFTKTRYCHK*

>peptide 2 (45 aa)
MAPEMYSPRPGTVTSRVRYACRLASVFSNPIDAKRFPQVGEGSGL*

>peptide 3 (50 aa)
REQCFGQQVRRRSSFHRQWIGREFPQREWHQRCIHQDQVLSQVGYGMPAD*

Sequence

>CNT30708793
CCGGGAACAATGTTTTGGTCAACAAGTACGTCGACGATCTTCCTTCCATCGACAGTGGATTGGTAGAGAGTTTCCTCAAAGAGAATGGCACCAGAGATGT
ATTCACCAAGACCAGGTACTGTCACAAGTAGGGTACGGTATGCCTGCCGATTAGCTTCTGTGTTCTCTAACCCAATAGATGCCAAACGCTTCCCGCAGGT
TGGCGAAGGGTCTGGCCTTTGACCCACTCGCACTTGTCAAGAACAGGAGATGACTTGAGAAGAGTAGCAGAAGCAGAGGCCATTGTTGAATCTTTAATCT
TATCCCCGCCAAGCAA