Detailed information on CNT30708472


BLAST search results

BLAST vs Swiss-Prot:
sp|P12360|CB11_SOLLC, E-value = 3e-37

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30515355Glycine maxJuglans regia30.8421.4684.09132forward
CNT30525458Glycine maxPhaseolus vulgaris31.317.3994.03134forward
CNT30629575Glycine maxVigna unguiculata22.6623.6693.8197forward
CNT30609040Glycine maxGossypium raimondii30.8428.783.33132forward
CNT3037808Glycine maxCucumis melo30.6117.9782.44131forward

Expression of CNT30708472

Peptides detected in this lncRNA

>peptide 1 (78 aa)
MSSDSLNLSRFSGLGWPGIQSALIEKREEEALVTPKLERGTAVANLDFEEERRDGKAEIAVLINVLAAILSQSLKVVL*

>peptide 2 (30 aa)
MELDCLGRLLGPQELLPIPEPLPTSMAHLQ*

Sequence

>CNT30708472
CTTTGGTGCTCCACAAAGGAAATAGCAAGGAATTCAATGGCCAGAATGGTGGGTAGGGTGCCCCATGGAACTGGATTGCCTAGGTAGGTTGCTTGGCCCC
CAGGAACTGCTGCCCATTCCTGAGCCTTTACCCACAAGCATGGCCCATCTGCAGTGAATGAGTTCTGACTCTTTGAACCTCTCAAGATTCTCTGGTCTAG
GCTGGCCTGGCATCCAGTCAGCACTCATAGAAAAGCGAGAAGAAGAGGCATTGGTGACACCAAAGCTAGAAAGAGGAACTGCGGTGGCAAATCTGGATTT
TGAGGAAGAAAGGAGAGATGGGAAGGCTGAGATAGCAGTACTCATCAATGTGTTGGCAGCCATTCTTTCTCAGAGTTTGAAAGTTGTTTTGTGAGAATGG
TGTGAAGGGAATGGCACTGGCAATGTTT