Detailed information on CNT30708469


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30375299Glycine maxArabidopsis thaliana7.8827.1184.91106forward
CNT30525352Glycine maxPhaseolus vulgaris5.8720.7389.8779forward
CNT30478064Glycine maxArabidopsis halleri6.6128.1685.3989forward
CNT30642616Glycine maxCannabis sativa4.1620.6687.556forward

Expression of CNT30708469

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MHVSASILTILQRLNKTAVFFFFLQKTLTTASMAHLQ*

>peptide 2 (56 aa)
MSSDSLNLSRFSGTSPRRRGSNPKSLKHKNKTCMHKSTSQQNPANHSKSLKYATTK*

>peptide 3 (60 aa)
VGCPMELDCLGRLLGPQELLPIPEPLPSCLSPMPLEPKSLAAKYKKFQHIKVFFNIGDNV*

>peptide 4 (32 aa)
MTLASVLFNKSRFMHTYAVLVSKNSYCQSIIS*

>peptide 5 (36 aa)
MPQQSDFFSVPISIYLYFLLSFLHLIKNNVLLVCIV*

Sequence

>CNT30708469
GGGTAGGGTGCCCCATGGAACTGGATTGCCTAGGTAGGTTGCTTGGCCCCCAGGAACTGCTGCCCATTCCTGAGCCTTTACCCAGTTGCCTAAGCCCAAT
GCCTCTGGAACCAAAATCCCTGGCTGCAAAATATAAGAAATTTCAGCATATTAAAGTTTTTTTTAATATCGGGGACAATGTCTGATACCACGTACTTTTT
CAAGTGAAATAAAATTGGATCTCAATATATGACGTTGGCTAGTGTGTTATTTAACAAATCGAGGTTCATGCATACGTATGCAGTATTAGTGTCAAAAAAT
TCATATTGTCAATCAATCATATCATAAAACATCCTTCATATTACTTGTGTAAGATAGTAATAATAAGAGTGAACAAACTTTTTCTATAATAAGAGTGAAC
AAACTTTTTTTTTGAGTAAAAAGAGAGAACAAACTTATTATATATAATACTGTGATTAAATGAAAGTATTCATGAAATGTTTACTATCCTAAATGCATGT
TTCTGCTAGCATCTTAACAATTTTACAAAGACTAAACAAAACCGCTGTTTTTTTTTTTTTTTTACAAAAGACACTTACAACAGCAAGCATGGCCCATCTG
CAGTGAATGAGTTCTGACTCTTTGAACCTCTCAAGATTCTCTGGTACTTCACCAAGACGAAGAGGGTCGAATCCAAAGTCACTGAAGCATAAGAACAAAA
CGTGCATGCACAAATCAACATCACAACAAAACCCAGCAAACCATTCAAAATCACTTAAATATGCCACAACAAAGTGATTTCTTTTCAGTTCCAATCTCTA
TTTATTTATATTTTTTACTTTCATTTTTACATTTAATAAAAAACAATGTACTTTTAGTTTGTATAGTTTAGATTAGTCATTTTCCCACTAAATATGTTCA
AGACAAGTTTTCCAACAGAGATTAATTCATCAAACTGTAATATTTCACACCAATAATATGATTGCCTAAAAAAATGAGGGTATGAAAACATAAGTTCCTT
TCAATGTACACTACATGCTAAGTTCTTTTTCTAGAAAAATAAACAAATCATAATTTCAAGAACTGAAAACATGTTGAAACATTATTGTACTAAACAAATA
AAAAAAGGGAAATTGAAGCATACCCAGGTGCTGAACCATCAAGGTAAGGAGGTCTAGGCTGGCCTGGCATCCAGTCAGCACTCATAGAAAAGCGAGAAGA
AGAGGAACTGCGGTGGCAAATCTGGATTTTGAGGAAGAAAGGAGAGATGGGAAGGCTGAGATAGCAGTACTCATCAATGTGTTGGCAGCCATTCTTTCTC
AGAGTTTGAAAGTTGTTTTGTGAGAATGGTGTGAAGGGAATGGCAC