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Detailed information on CNT30708380


BLAST search results

BLAST vs Swiss-Prot:
sp|P12302|PSBP_SPIOL, E-value = 1e-33

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30619846Glycine maxCajanus cajan24.3123.8896.99133forward

Expression of CNT30708380

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MRKNQILNFSQQVETGVTVFKIFIYYHFSF*

>peptide 2 (37 aa)
MQFIRKLSLKLMMPELAREQQFLVTKFGHYFIDFVGT*

>peptide 3 (31 aa)
MNSFPSFTVALIMWCLPPSSPSAVLVNTDRK*

>peptide 4 (67 aa)
CTLHKSSCSLEPPLVSSLSLANEQFSIFYSCSNYVVLATFISISSPCQHRQKIVRLPINHRCCRLFS*

Sequence

>CNT30708380
GCTGCACTCTCCACAAATCTTCTTGCTCCCTTGAACCACCTCTTGTCTCCAGCTTGAGCCTTGCAAATGAACAGTTTTCCATCTTTTACAGTTGCTCTAA
TTATGTGGTGCTTGCCACCTTCATCTCCATCAGCAGTCCTTGTCAACACAGACAGAAAATAGTACGGCTTCCCATCAATCACAGGTGTTGCCGCCTGTTT
TCCTAGTAAATAATCCACCTGCAATGAGGAAAAACCAAATCTTGAATTTCAGCCAGCAAGTAGAAACTGGTGTCACTGTCTTCAAAATTTTCATATATTA
CCATTTTTCTTTTTGAATGTTTACTAAAAAATGTTAAAATTAGTAAAGGAATAATCTTTATGCAATTTATAAGAAAATTGTCACTAAAACTTATGATGCC
AGAATTAGCAAGAGAACAACAATTTTTAGTAACTAAATTTGGTCACTATTTCATTGATTTTGTTGGAACTTGAAACATAAAAACTGTACATTAATGGGGC
TACAAGTGTTCCATATTAATAAGAAAAAAAACAGAACTACTAGTTTA