Detailed information on CNT30708369


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONGMAT000595, E-value = 5e-93

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692294Glycine maxOryza sativa13.7620.895.1883forward
CNT30191267Glycine maxSecale cereale12.9422.9494.8778forward
CNT30224947Glycine maxHordeum vulgare13.627.8993.982forward
CNT30395161Glycine maxTriticum turgidum13.623.0393.982forward
CNT3085655Glycine maxVigna radiata53.467.2284.16322forward
CNT30721855Glycine maxTriticum spelta13.621.5893.982forward

Expression of CNT30708369

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MLLLRLRINRISCLHFCFSLCYFVCTLQPHSLMLILILDYICCNSF*

>peptide 2 (56 aa)
MFLAENNAVTAFANQQDILFAFLFLSLLLCLYIAATFSYVDFDFGLYLLQFFLGFD*

Sequence

>CNT30708369
ACTCATTACACGTGCAGGCTGGGCCTTTGCGTTAGAGCCCAAAACTTCCTAATAGTTTGCTAGGGTTTCTTGTAGGCTATAAATAGTTGCAACCTTCCCA
TTCCTTTTCTTCTTAATCCTCTGTTGTTTCTCAGCCGCCTCGGCTAGGGTTCGGAAACGAAGAAGGGTTCTGTTTTCTTTTCGCGATGAGGGCCAAGTGG
AAGAAGAAGCGTATGAGGAGGCTGAAGAGGAAGCGCCGAAAGATGAGACAGAGATCCAAGTAGTGCGTTAAACCTAGTTTGTTTCCGTTGCTTTTACAAT
TGCTTATGTTGTCAAATAGGACACCCAGTTGTTAGTGGCACTGGTCTCTCCTTTTTGATGTTTTGATACATTTTGTTGGATTTTATTTCGTCTTATGTTC
TTAGCTGAAAACAATGCTGTTACTGCGTTTGCGAATCAACAGGATATCTTGTTTGCATTTCTGTTTCTCTCTTTGCTACTTTGTCTGTACATTGCAGCCA
CATTCTCTTATGTTGATTTTGATTTTGGATTATATCTGCTGCAATTCTTTTTAGGGTTTGATTAAATTATCCCGATGTTAGATCTTAAGGCTTAATACTT
AAA