Detailed information on CNT30708208


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30632293Glycine maxVigna unguiculata10.0424.5689.93139reverse complement
CNT30174589Glycine maxVigna angularis8.0923.4889.29112forward

Expression of CNT30708208

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MKSLYHYLLPSLSLFCFIPLFLHCAETSDP*

>peptide 2 (35 aa)
MHLTVIRLKVGCNRKLLKENIHTQKNLVFTYCTLQ*

>peptide 3 (36 aa)
AIKYLSFFHSILFHIHTFRIPFYLKEMYILLHTFQL*

>peptide 4 (38 aa)
MPKSNFPLIYLKILLATKMGGFLHFSIIFLIRPTLLAR*

>peptide 5 (57 aa)
MHRYPTICLYSVASTNCLLPSFSNLRPGVKEGIICFLNSSFKKNYIGFLSHRRFYDL*

>peptide 6 (59 aa)
MLCSSTQTPFIIRKQYAKIQFSFDIPQNSFGYQDGRFPPLLYNFSYQANTVGQVRYSDA*

Sequence

>CNT30708208
CTGCCATTAAGTATTTATCGTTTTTCCATTCCATTCTCTTTCATATTCATACTTTTCGCATTCCATTCTATTTAAAAGAGATGTATATTTTGCTACACAC
TTTCCAGCTATGAAATCTTTGTATCATTATCTCCTCCCTTCCTTGTCTCTCTTTTGTTTTATTCCTTTGTTCCTTCATTGCGCCGAAACGTCGGACCCAT
AACTGTTTCTCAACGGCGCCACTAGACAAGGCCATGGAGCCAGAATTGTCGCATCAAGTAGACCATGACAAGTAGTGCTCCAACTGCACTCATCTTTAGA
TGGGTGGGACTTAGAGAGGCCATGAAAGATCCTTTGTACTAGCATCCAACTCGACTTCAACGACGAGAATCGGATCTCTAAAAATGAATGCTGAATGCAT
CTTACCGTTATTAGATTGAAGGTAGGTTGCAACAGGAAACTCCTAAAAGAGAATATTCACACACAGAAAAATCTAGTATTCACTTACTGTACTTTACAGT
GACTCCCTTATATAGGAAAGTTTATAGTTGTCACCAGCAGCCCTCTAACACAAGTTTAGCTCCTCCAATAAAGTTTCCAGCCACAAAGCTGGACAAGCTA
CCATAGATGTAACTATATATTTCACTTCACATGAAGATCAGGCTACCACACTTTGCTACTTTGAGTATTGAGAGGTTAGTGCTCTGCCAAACATAAAATC
ATACAATGTTGTGCTCTTCTACTCAAACACCTTTTATCATTAGGAAACAATATGCCAAAATCCAATTTTCCTTTGATATACCTCAAAATTCTTTTGGCTA
CCAAGATGGGAGGTTTCCTCCACTTCTCTATAATTTTTCTTATCAGGCCAACACTGTTGGCCAGGTAAGGTACAGTGATGCATAGGTATCCTACAATCTG
TTTATATAGTGTAGCATCAACCAATTGTTTACTCCCTTCCTTTTCCAATTTGAGACCAGGAGTGAAAGAGGGAATCATTTGTTTCTTGAACAGTTCTTTT
AAAAAAAATTATATCGGATTTTTGAGTCATAGGAGATTTTATGATTTATGACTTGGAGGATTTTTAAGAATAGAAAGGAATAACTACATTGAGTTCATTT
CAGCTGGAGTGGTGGTTGGATTGCAATTAGTCATGTTGAATCTCTAGGACAACAGTCGCATACTTCTTCTGATGTGTGAAAATTCCCTTCCTAGTGGTAG
GAAACTCTATTCCAAGAAAGTAGGATAACACCCCCAAATCTTACATTTCAAATTCTTTGATCATCCTCTTCATTAACTCAACTATTTCTACTTCATTGCT
ATCAGTCACTAACAGATCATCCAAATATAGACACAGTCAATGGATGCGAAGCTGTTGAGTTTCCAACATAAAGACCATGTTCAGC