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Detailed information on CNT30707309


BLAST search results

BLAST vs Swiss-Prot:
sp|P93604|LRK10_WHEAT, E-value = 3e-106

BLAST vs NONCODE:
NONPOPT000734, E-value = 6e-41

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30314996Prunus aviumCorylus avellana84.8855.6380.82657forward
CNT30699090Prunus aviumQuercus lobata32.4363.8780.08251forward
CNT3069516Prunus aviumQuercus suber29.3372.0683.7227forward
CNT3090659Prunus aviumSolanum tuberosum17.4424.1580.74135forward
CNT30713283Prunus aviumMalus domestica golden67.3142.1979.65521forward
CNT30152410Prunus aviumPrunus persica16.5430.2687.5128forward
CNT30573521Prunus aviumVitis vinifera31.9137.7183247forward
CNT3026124Prunus aviumPopulus trichocarpa41.646.3381.99322forward

Expression of CNT30707309

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MRFDIKMKDSLVTSVVKVLNSLGYAESNILQLLPTKEMVVAVC*

Sequence

>CNT30707309
CGAGTTTCTTTGCGATTTTAGCATCAATCTCTTGCTCAACGTGGATGCGGATGTCTTCTCCTTGATCTAGAAGATTATAGATCCATTCGGGGAAATAAAC
TTGGCTGCTGTTCGCCTCTGTGACCTGAACATTTTTCCTGCCTCCAACCATTTCAAGTAACAACATTCCAAAACTGTACACATCTGACTTGTAGGACACA
TTACCGAAGTTCCTAGAGAAGACTTCAGGTGCGATGTAACCCATGGTGCCCCTAGCAGTTGTCAAGGAAACTGCACTTTGATCATTGGCGCACAACTTGG
AAAGACCAAAATCAGAGATTTTTGGATTGAAGGTTTCATCCAAAAGAACATTATGAGGTTTGATATCAAAATGAAGGATTCGTTGGTCACATCCGTTGTG
AAGGTACTCAATTCCCTTGGCTACGCTGAGAGCAATATATTGCAGCTTCTCCCAACCAAGGAAATGGTTGTTGCTGTCTGCTGATGTTATAAAATTCTGT
AGTGAACCGTTTGGTGCAAATTCATAAACCAAAGCTCGTCTAAATCCATCAGCACAATAGCCAACCAATCGAACCACGTTGACGTAGTGGATTCGACCCA
ATGTTCCCACTTCATTGATAAACTCTTCTCCATTTCCTTTGGAATTGTTGAGGATCTTTACAGCAACAAAGATCTCATTGGAAAGCTTTCCTTTGTACAC
TGTTCCAAAGGTCCCCTGTCCCAGCTTGTCTCTAAACGTATTGGTGATCCTCTTTATATCAGCATAAGAGTACC