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Detailed information on CNT30707286


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3046633Prunus aviumPrunus dulcis52.2220.9594.24330reverse complement
CNT30289016Prunus aviumTriticum aestivum12.8225.6393.8381reverse complement
CNT30245388Prunus aviumAvena sativa12.8223.4193.8381reverse complement
CNT3067980Prunus aviumLeersia perrieri10.622.2692.5467reverse complement
CNT30720411Prunus aviumTriticum spelta12.8222.5693.8381reverse complement

Expression of CNT30707286

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MKKIMRCVPPRLIAALTFASVTLMIRFHTSMIFIENLVAKFLVA*

Sequence

>CNT30707286
TATAATGCCCTCATTCAAGTTTATTAAGTATTGTATTGTTTCACATGTTCCGAATATTTACGTACATTTAACCTTTAACTAAAGGAAAACCTTGGTGCAG
TATCATCAAACCCTTGGTGAAAATGTCCATTAGTGCCGTTCACATATTTCTTTGTGATGTTTCTGTTTCTTGACGGTTCTTCAGGGAAATTGAAGCATTT
CTCATAATATGCCCCTCTTGTGCTATCTCTTTGTGTAAATAATGTCATAATATGAAGAAAATTATGAGGTGTGTGCCCCCTCGTCTAATCGCAGCATTGA
CATTTGCTTCAGTAACCCTAATGATCAGATTTCATACTAGTATGATTTTCATTGAGAACTTGGTAGCGAAATTCCTTGTCGCATAAGTAGCGACTACACG
AATGGTGTAACGACTGCCCCCCGTCTTCGACATGGACCCGAAAGAAGAGAAGTTATAATTTTTAAAGTATACTATCAGCATTTTATGAGATCTTGAGGTA
GTGTGAGCATTGTATATGGATTAGAATGCCCAGCAAGTAGTAGTTTTTTTATTATTTATTTTTAAGTTGCCGTATCTGGTAAACAAAATTGTGTAGAGCT
CTGGTTAGATTTTGTTTGGTATTGTATTTCTT