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Detailed information on CNT30706529


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691492Prunus aviumOryza sativa15.7331.8880.17242forward
CNT30523825Prunus aviumSetaria italica6.732.5986.41103forward
CNT30316259Prunus aviumCorylus avellana8.9743.2682.61138forward
CNT30549105Prunus aviumIpomoea triloba9.8226.5483.44151forward
CNT30515171Prunus aviumJuglans regia15.2824.8986.38235forward
CNT30728342Prunus aviumCorchorus capsularis15.1535.379.4233forward
CNT3046104Prunus aviumPrunus dulcis18.9966.0695.89292forward
CNT30298239Prunus aviumTriticum aestivum9.1720.8986.52141forward
CNT30221132Prunus aviumHordeum vulgare6.744.5986.41103forward
CNT30564991Prunus aviumActinidia chinensis9.2335.1587.32142forward
CNT30590722Prunus aviumMusa acuminata9.1732.0584.4141forward
CNT3085716Prunus aviumVigna radiata11.8359.0981.32182forward
CNT30541063Prunus aviumBrassica napus15.1529.3581.12233forward
CNT30234760Prunus aviumBrassica oleracea7.6138.3683.76117forward
CNT30437220Prunus aviumAegilops tauschii821.585.37123forward
CNT30463151Prunus aviumSaccharum spontaneum824.4585.37123forward
CNT30133582Prunus aviumLolium perenne6.8352.585.71105forward
CNT30609232Prunus aviumGossypium raimondii15.0843.6981.9232forward
CNT30227805Prunus aviumAnanas comosus12.9441.8182.41199forward
CNT30646773Prunus aviumRosa chinensis14.3759.8981.45221forward
CNT30712987Prunus aviumMalus domestica golden9.7542.0287.33150forward
CNT30365858Prunus aviumSorghum bicolor833.9886.18123forward
CNT30595794Prunus aviumOryza meridionalis6.3144.2987.6397forward
CNT30573330Prunus aviumVitis vinifera4.6223.2888.7371forward
CNT30644102Prunus aviumCannabis sativa7.2225.5285.59111forward
CNT3024898Prunus aviumPopulus trichocarpa12.0335.7183.24185forward
CNT30325169Prunus aviumAsparagus officinalis15.2188.381.2234forward
CNT3038976Prunus aviumCucumis melo14.9533.6782.17230forward
CNT30495761Prunus aviumDigitaria exilis7.4829.3483.48115forward
CNT30116468Prunus aviumOryza nivara13.853084.51213forward
CNT30112244Prunus aviumFicus carica12.2928.6487.3189forward
CNT3050609Prunus aviumCucumis sativus15.2823.8682.55235forward

Expression of CNT30706529

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MGISGAALGISGRENCVDKNKGANDLSTKP*

>peptide 2 (43 aa)
MALITTTWYKAASAAPMNVPVMGMVAKCTKNTANPIGKGAKIC*

>peptide 3 (76 aa)
MGYRVGPTTKNLEAGALLEALHHRRTGDRPKRLHDDVENRPCQRQLPGQKQPERHRRVYVTPCRIKQPLINLIMKK*

>peptide 4 (39 aa)
EFQFVCLCVVEMRVGMVGVISELKRTHFTAKLHTMSTHI*

>peptide 5 (42 aa)
MTSAHQARTAAPVAAPCSPCLHLGSEPTSQSAASPKTCWLPT*

Sequence

>CNT30706529
AAGAATTTCAATTTGTTTGCTTGTGTGTGGTGGAGATGAGAGTAGGAATGGTCGGTGTTATTTCTGAATTGAAAAGGACACATTTCACTGCCAAATTACA
TACAATGAGCACTCACATCTGATGGGGGCCTTTGCCTAAAAAAAAGAAAGGAAACCAGGGCCGTTGATTGTTGAAGCAGATCAAATCAAACACAGAAAAG
TAAATAAACAAACTCGATCGATCGGCTTCTTGAGAGAGCTTGATAAGTACACGTACGCATCATGTTGACGATCATCATAAACCATTAACACACAAATTTA
AGACTTGGTCTTGAAGGGGATGGCTCTGATCACAACCACGTGGTACAAAGCTGCAAGTGCTGCCCCAATGAATGTTCCAGTGATGGGGATGGTAGCCAAG
TGCACCAAGAACACAGCGAACCCAATAGGCAAAGGTGCCAAAATCTGTTAATCAAACCCAATAATTCAAATTAACAACCAATTAATCACCAATTAACAAA
TTAACAAGATCCAGCTAGGCTAAGGAAAATGATCAAACACTTAATTAGCATACATACCGGAACATGGGAATCTCTGGCGCTGCGCTTGGCATCAGTGGCA
GAGAAAACTGTGTAGACAAGAACAAAGGTGCCAACGATCTCAGCACCAAGCCCTGATCCCTTGGTGTAGCCATGGGCTACAGAGTTGGCCCCACCACCAA
GAACCTCGAAGCTGGAGCTCTTCTCGAAGCCCTTCACCACCGCCGCACCGGCGATCGCCCCAAGCGTCTGCATGACGATGTAGAAAACCGCCCTTGTCAG
AGACAGCTTCCGGGCCAAAAACAGCCCGAACGTCACCGCCGGGTTTATGTGACCCCCTGCCGAATTAAACAACCATTAATTAACTTAATCATGAAAAAAT
AACGATACATGGTGCCGACGGAGTCTAGCTCAGTGAAAAAGACCTTGACTTGCAAATCAGTGTTCGGTGCATTTTGGGGAGTGTAGTTACCTGAGATGCC
GGCGGTGCTGTAGACCAGGGCGAAGATGGTACCGCCGAAAGCCCAAGCGATCCCTTGAATCCCGACCGACGAGCACATTGACTGAGACTTCTTGACGCCC
ATCACCGTCAAAATGGTGATGTACAGGAAAAGGAAGGTGGCGATGAACTCGGCGATCCCAGCCCTGTAAAACGACCATGACGTCAGCTCACCAGGCTCGA
ACAGCGGCGCCGGTGGCGGCTCCTTGTAGTCCTTGCCTTCATCTTGGGTCTGAGCCGACGTCCCAATCGGCTGCCTCTCCGAAAACTTGTTGGCTCCCAA
CTTGACATCCTCTTCCTTGCCCTCCATTTTCGCTTTAATTACAGAACTAAACCAAGCGCAGAGACCGTTTGATCTATCTGATGTGAGAGACTCTGTGAGA
GAGAGAGAGAGAGAGAGCAGTGTTTGTTTGAGTGGAGAGTGGGTTATGGCGTGCGATTATATATAGCAAGTGTAGCGCCTGAGTTTGAAGCTGACGAAGT
GAGGGCGGGTGGTGGCGGGACCCAACGGGTGTTTTAAT