Detailed information on CNT30706384


BLAST search results

BLAST vs Swiss-Prot:
sp|P92999|GL118_ARATH, E-value = 3e-93

BLAST vs NONCODE:
NONTPRT002878, E-value = 1e-22

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30515314Prunus aviumJuglans regia61.3859.3382.1391forward
CNT3019818Prunus aviumCitrullus lanatus12.426.6988.6179forward
CNT3071407Prunus aviumQuercus suber28.4177.0281.22181forward
CNT30631896Prunus aviumVigna unguiculata33.2833.2383.02212forward
CNT30711805Prunus aviumGlycine max18.6848.5782.35119forward
CNT30717911Prunus aviumMalus domestica golden34.5427.0383.64220forward
CNT3031606Prunus aviumTheobroma cacao16.823.5287.85107forward

Expression of CNT30706384

Peptides detected in this lncRNA

>peptide 1 (39 aa)
AFSAFSTYNYCFFLLLIVVVPELFLEIVNHLVVNLEGLG*

>peptide 2 (35 aa)
MGGLEPNTALAMVITPGFWLLSPAKATASTCPTLS*

>peptide 3 (34 aa)
MRAKDMPRVFNPARLSTFTAVTFEPTGFFVFLGF*

>peptide 4 (31 aa)
MRPIGNTNTSPLYNTLVNRRLPSPLDVTKPT*

Sequence

>CNT30706384
GCCTTTTCTGCTTTTTCCACATATAATTATTGTTTTTTTCTTCTTCTAATTGTTGTCGTACCAGAACTGTTTCTGGAGATAGTCAACCACCTTGTTGTCA
ACTTGGAAGGCCTTGGTTAGAACATCAGGATTGATGGGAGGCTTGGAGCCAAACACTGCATTGGCTATGGTGATCACTCCTGGGTTCTGGCTGCTAAGCC
CAGCAAAGGCCACAGCGTCGACATGTCCCACATTGAGTTGAAAGTGAATGAGGCCAATTGGGAACACAAACACATCTCCCTTGTACAACACTTTGGTGAA
TAGGCGATTGCCATCACCATTGGATGTGACGAAACCAACATAGAGTGTTCCTTCCAGGACCACAAGGATTTCGGTGCCGCGAGGGTGAGTGTGAGGAGGG
TTTAGGCCATTTGGTGCAAAGTCTATGCGAGCCAAGGATATGCCGAGAGTGTTCAATCCTGCTAGGTTGTCCACGTTCACAGCTGTCACATTTGAACCAA
CCGGATTTTTTGTGTTTCTTGGATTTTGAAGCCCAGAAAAGAAGAAATCATTTGCAATGACAAGCTTTGGGTCCTTGCAGAATTTCCCATTCACAAACAC
TGTTTGCACCAAACAGAAAAAAAGTAATAAAATTTTA