« Back to Prunus avium search


Detailed information on CNT30706356


BLAST search results

BLAST vs Swiss-Prot:
sp|P69322|UBIQP_PEA, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30701438Prunus aviumQuercus lobata82.3678.4182.951144forward
CNT30525141Prunus aviumPhaseolus vulgaris82.3666.0982.781144forward
CNT30629221Prunus aviumVigna unguiculata74.2380.4281.961031forward
CNT3045767Prunus aviumPrunus dulcis44.1341.7695.11613forward
CNT30511508Prunus aviumSolanum lycopersicum79.7784.7183.031108forward

Expression of CNT30706356

Peptides detected in this lncRNA

>peptide 1 (94 aa)
MEGGLLLDVVVGEGAAILKLLASKDQPLLVRGNTLLVLDLGFDIVDRVRAFNLEGDGLSGEGFHKDLHLELERTLMSFRDFALLLLSSTMKGLA*

>peptide 2 (31 aa)
MVSELSTSKVIVFPVSVLTKICIPPRRRSTK*

>peptide 3 (37 aa)
MVSELSTSRVIVFPVRVFTKICIPPRRRSTKCRVDSF*

>peptide 4 (61 aa)
MSLCWSGGMPSLSWILALTLSIVSELSTSKVMVFPVRVLTNICIPPRSRSTRWRVDSFWML*

Sequence

>CNT30706356
TTTTTATTTATTAACTAAATAGTTTCTGGTGAACCATCCATTGGCCAATTAAAGAGTACGAAATATATAACTACAGAATTTAAAATAGTCACTGTTCACT
GCTCAGACAAGGATGGAACCACAAGCATCATCATTCAGAATTCAGAAACCGCCACGGAGACGAAGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGT
AATCTGCAAGAGTCCTCCCGTCCTCCAGCTGCTTACCCGCAAAGATGAGCCTTTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTTAGCTTTCAC
ATTATCAATGGTATCAGAACTCTCCACCTCCAGAGTTATCGTCTTCCCAGTGAGGGTCTTCACAAAGATCTGCATCCCACCACGCAGACGGAGCACCAAG
TGCAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCAAGGGTCCTTCCATCCTCCAGCTGCTTGCCTGCAAAAATCAACCTCTGCTGGTCTGGAGGGATAC
CCTCCTTGTCCTGGATTTTAGCCTTCACATTGTCAATAGTATCAGAGCTTTCCACTTCCAAAGTAATTGTCTTCCCAGTCAAAGTTTTCACAAAGATTTG
CATACCACCACGCAACCGAAGCACCAGGTGCAAAGTTGATTCCTTTTGGATGTTATAATCAGCAAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAG
ATTAGCCTCTGCTGGTCCGGGGGAATGCCTTCCTTATCCTGAATTTTTGCCTTGACATTATCTATGGTATCCGAGCTTTCAACCTCCAAGGTTATCGTCT
TCCCAGTAAGTGTCTTGACAAAGATTTGCATACCCCCACGAAGACGAAGCACTAAGTGAAGGGTTGATTCCTTTTGAATATTGTAATCAGCCAGGGTGCG
GCCATCCTCAAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATGCCCTCTTTGTCTTGGATCTTAGCCTTGACATTATCAATCGTGTCG
GAGCTCTCAACCTCCAAAGTGATGGTCTTTCCGGTGAGAGTCTTAACAAATATTTGCATTCCACCGCGGAGTCGGAGCACCAGATGGAGGGTGGACTCCT
TCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCCGGGGGAATACCCTCCTTGTCTTGGAT
CTTGGCTTTGACATTGTCGATCGTGTCAGAGCTTTCAACCTCGAGGGTGATGGTCTTTCCGGTGAGGGTTTTCACAAAGATCTGCATCTAGAGTTAGAGA
GAACTTTGATGAGCTTCAGGGATTTCGCTTTGCTTTTGCTTTCTTCAACGATGAAGGGCTTGGCATAGAAAAGCGCCTTCATTTATAGG