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Detailed information on CNT30706353


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG85|UBI1P_NICSY, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693865Prunus aviumOryza sativa50.9371.0784.32899forward
CNT30500417Prunus aviumCoffea canephora64.5956.682.541140forward
CNT30615929Prunus aviumSesamum indicum63.6833.681.761124forward
CNT30727227Prunus aviumCorchorus capsularis38.8759.786.3686forward
CNT30525173Prunus aviumPhaseolus vulgaris62.8953.4282.971110forward
CNT3086449Prunus aviumVigna radiata62.5570.2783.061104forward
CNT30233220Prunus aviumBrassica oleracea43.899.7485.12773forward
CNT30553671Prunus aviumOryza glaberrima50.6576.8783.89894forward
CNT3066849Prunus aviumLeersia perrieri64.5385.2582.881139forward
CNT30153746Prunus aviumPrunus persica30.7658.8997.61543forward
CNT3028051Prunus aviumTheobroma cacao64.0292.783.541130forward
CNT3024139Prunus aviumPopulus trichocarpa50.3782.7785.49889forward
CNT30330420Prunus aviumDioscorea rotundata50.0852.2583.71884forward
CNT30116852Prunus aviumOryza nivara50.9375.6784.2899forward

Expression of CNT30706353

Peptides detected in this lncRNA

>peptide 1 (62 aa)
VKHIIQIWTAPKTILACIHNGKDKEQTEEEETDQRLLLRHKTRNQNNLVNALQREQVKVLLK*

>peptide 2 (61 aa)
MSLCWSGGIPSLSWIFALTLSIVSELSTSKVIVFPVRVLTNICIPPRRRSTKWRVDSFWML*

>peptide 3 (61 aa)
MSLCWSGGMPSLSWIFALTLSMVSELSTSKVIVFPVRVLTKICIPPRRRSTKCRVDSFWML*

>peptide 4 (30 aa)
MVFPVRVFTNICIPPRSRSTKCRVDSFWML*

>peptide 5 (56 aa)
MPSLSWILALTLSMVSELSTSRVMVLPVRVFTKICICSRKTTLNKFCFLGIHKNKT*

Sequence

>CNT30706353
GTAAAACACATCATACAAATTTGGACTGCCCCCAAAACAATTCTTGCCTGCATACACAATGGTAAAGACAAGGAGCAAACAGAGGAAGAAGAAACAGATC
AGAGGCTACTGTTAAGACATAAAACTAGAAACCAAAACAATCTCGTTAATGCACTTCAAAGGGAACAAGTAAAAGTACTTCTAAAATAAAAACAGGGACA
TTTCAAACTAGCAACTGGGGGTACATAGACTAGATTTCAACCGCGGATTCGAATCCTTTGCTTCGATTTTAACCAGACCACATCTCCAATCCGACCATCC
AAAGTTCCAAACACAATATTATAGAGCAATATAGATGCATGTATTAACAGAAATTTCAAATGCTAATAAAAAACAGAGCAGATACATACAAAGCAAGTTT
ATTTATTAACTAGATAGTCTTAGTGTGACCCATCATCCATCGGCCAAGTACGAGAATTCAAAACAAAAAATACTTAACAAAGCCACTGTTCACTGATCAG
AGAAGGATGGAACCACAAGGATCATTCAGAATTCAGAAACCGCCACGGAGACGAAGGACAAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCTGCAA
GAGTCCTCCCATCCTCAAGCTGCTTACCGGCAAAGATGAGCCTCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTCACATTATCAAT
TGTATCCGAACTCTCCACCTCCAACGTTATGGTCTTGCCAGTCAGAGTCTTCACAAAGATCTGCATCCCACCACGCAGTCGAAGCACCAAGTGCAGAGTG
GACTCCTTTTGAATGTTGTAGTCAGCAAGGGTCCTTCCGTCCTCGAGCTGCTTGCCTGCAAAGATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTGT
CCTGGATTTTGGCCTTCACATTATCAATAGTATCAGAGCTTTCCACTTCCAGAGTAATGGTTTTCCCAGTCAGAGTTTTCACAAATATCTGCATACCACC
ACGCAGCCGGAGCACCAAGTGCAGAGTCGATTCTTTTTGGATGTTATAGTCAGCAAGGGTGCGTCCATCCTCAAGCTGCTTACCAGCGAAGATGAGCCTC
TGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTGTCAATGGTATCTGAGCTTTCAACTTCCAAGGTGATTGTCTTCCCTGTAA
GGGTCTTGACAAAGATCTGCATACCACCACGGAGACGGAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGACCATCCTC
AAGCTGCTTTCCAGCAAAGATGAGCCTCTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGGATCTTTGCCTTGACATTGTCAATAGTATCCGAGCTTTCA
ACTTCCAAGGTGATTGTCTTCCCGGTAAGGGTCTTGACAAATATTTGCATACCACCACGGAGACGTAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGT
TGTAATCGGCGAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCTTT
GACATTGTCAATGGTGTCAGAGCTTTCAACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTTTTCACAAAGATCTGCATCTGTTCACGCAAAACAACCCTA
AATAAATTTTGTTTCTTGGGAATTCATAAAAACAAAACATGATCTTGGAAAATGATTGATTAAGT