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Detailed information on CNT30705866


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONGMAT000067, E-value = 3e-61

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30616442Prunus aviumSesamum indicum78.2856.1579.11584forward
CNT3091732Prunus aviumSolanum tuberosum43.328.3682.66323forward
CNT30508793Prunus aviumSolanum lycopersicum33.6565.0382.87251forward

Expression of CNT30705866

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MPFLQHREKTGHLKWVTDEGLGSANNLETSCPHDMEFPTLENEMV

>peptide 2 (57 aa)
MWDYMQVKSGCKQVMLDCNLVKLDCNLEKWDCNLEKWDCNLEKWGYSWVRWVSMMDL*

>peptide 3 (69 aa)
MVTFLDCLESMPTMDCIWLTEDCNLEMWGYSWEKLGCNQEKLGCRPVRLGCRMEMWGCRRATLGCRKVM*

Sequence

>CNT30705866
TGTAATTTGGAGACGTAGGACTATATGGACTAGATGGTGACATTCTTGGACTGCTTGGAGAGTATGCCGACGATGGACTGTATTTGGCTGACTGAGGATT
GTAACTTGGAGATGTGGGGCTATAGCTGGGAGAAGTTGGGCTGTAACCAGGAGAAGTTGGGCTGTAGGCCGGTGAGGTTGGGCTGTAGGATGGAGATGTG
GGGCTGTAGGAGGGCGACGTTGGGCTGTAGGAAGGTGATGTAGGGCTATAGGAAGGCGATGTAGGGCTGTAGGAAGGTGATGTGGGACTATATGCAGGTG
AAGTCGGGCTGTAAGCAGGTGATGTTGGACTGTAACTTGGTGAAGTTGGACTGTAACTTGGAGAAGTGGGACTGTAACTTGGAGAAGTGGGACTGTAACT
TGGAGAAGTGGGGCTATAGCTGGGTGAGGTGGGTGAGTATGATGGACTTGTAGGAGAATAGGCCGGACTGGTGGGACTGTACCCAGGAGAAGTGGGGCTG
TACCCGGGCGAGGTGGGACTATAACCAGGGGATGTGGGACTGTATCCAGGGGAGGACGGACTGTAGCCAGGGGATGATGGGCTGTAGCCCGGAGATGAAG
TAGGAGAGAATGCCATTCCTCCAACATAGGGAGAAAACTGGGCATCTGAAATGGGTGACAGACGAAGGTTTGGGCTCAGCAAATAATTTGGAGACATCAT
GCCCTCATGATATGGAGTTCCCGACACTGGAGAACGAGATGGTGTC