Detailed information on CNT30705847


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641813Prunus aviumNymphaea colorata72.6166.1294.791132forward
CNT30617948Prunus aviumSesamum indicum43.8752.7495.76684forward
CNT3048148Prunus aviumPrunus dulcis99.9498.8697.691558forward
CNT30165771Prunus aviumPistacia vera72.7462.992.951134reverse complement
CNT30147369Prunus aviumMedicago truncatula50.1610096.42782forward
CNT3027140Prunus aviumPopulus trichocarpa63.8978.9296.79996forward

Expression of CNT30705847

Peptides detected in this lncRNA

>peptide 1 (66 aa)
MSPVLLFIVTTFPCQDWVICAPAAFLGCGSRFSGSLSGIEPYFSVTRHHHGRPLSYHRKLIGQIFE*

>peptide 2 (44 aa)
MKFQRLPGPVGQGYRLVEYIIVARVRPRTSKSITDLLLPHTSLA*

>peptide 3 (43 aa)
MIRFSGLLATSRAANHPRRRDPNTSPNHSIGRSDGRCVQRAGM*

>peptide 4 (44 aa)
MLSQLFVFHKSENFTSDYEIRMPPSVPVNHYFDPEGQQNRTEIL*

>peptide 5 (44 aa)
MHPFQKSGFVARISSRITTVIRVVDTIKQTITDLMSHSQFHSLN*

>peptide 6 (35 aa)
MVETRTVFDRLRAPNFRSCLMKTSLANAFAVVRLS*

>peptide 7 (32 aa)
MKYECPRVSLLIITSIPKANRIGPKSYDVIPC*

>peptide 8 (38 aa)
LRLLLPLNDKVQWTSSDVAGSEPPTSPRSEHFTEPFNR*

Sequence

>CNT30705847
CTACGACTTCTCCTTCCTCTAAATGATAAGGTTCAGTGGACTTCTAGCGACGTCGCGGGCAGCGAACCACCCACGTCGCCGCGATCCGAACACTTCACCG
AACCATTCAATCGGTAGAAGCGACGGGCGGTGTGTACAAAGGGCAGGGATGTAGTCAACGCGAGCTGATGACTCGCGCTTACTAGGAATTCCTCATTGAA
GACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGGCCTGTCGGCCAAGGCTATAGACTCGTTGAATACATCATTGTAG
CGCGCGTGCGGCCCAGAACATCTAAGAGCATCACAGACCTGTTATTGCCTCACACTTCCTTGGCCTAAGCGGCCATAGTCCCTCTAAGAAGCTGGCCGCG
GAGGGATCCTCCGCATAGCTAGTTAGCAGGCTCCACTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCCTTGCGACCATACTCCCCCCGGAA
CCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTAAAAGTAACATCCGCCGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTAT
TTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGTTTAATGAAAACATCCTTGGCAAATGCTTTCGCAGTTGTTCGTCTTTCATAAATCCGAGAATTTCA
CCTCTGACTATGAAATACGAATGCCCCCGAGTGTCCCTGTTAATCATTACTTCGATCCCGAAGGCCAACAGAATAGGACCGAAATCTTATGATGTTATCC
CATGCTAATGTATCCAGAGCGTAGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGCACCGGAGGCACGACCCGGCCAATTAAGGCCAGGAGCGT
ATCGCCGGCGGACCGGTCGACCCAACCCAAGGTCCAACTACGAGCTTTTTAACTGCAACAACTTAAATATACGCTATTGGAGCTGGAATTACCGCGGCTG
CTGGCACCAGACTTGCCCTCCAATGGGTCCTCGTTAAGGGATTTAGATTGTACTCATTCCAATTACCGGACTCTATGAGCCCGGTATTGTTATTTATTGT
CACTACCTTCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGTCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAC
TTCTCCGTCACCCGTCACCACCATGGTAGGCCACTATCCTATCATCGAAAGTTGATAGGGCAGATATTTGAATGATGCGTCGCTAGCACGATGGCTGTGC
GATCTGTCGAGTTATCATGAATCATCAGAGCAACGGGCAGAGCCCGCGTCAGCCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCA
CGTATTAGCTCTAGAATTACTACGGTTATCCGAGTAGTAGATACCATCAAACAAACTATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTCTGAATT
AGTTCATACTTACACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAGG