Detailed information on CNT30705843


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30519100Prunus aviumJuglans regia59.7791.3695.7930forward
CNT30730407Prunus aviumCorchorus capsularis58.896.8396.07915forward
CNT30628171Prunus aviumDaucus carota59.7792.4595.16930forward
CNT30369025Prunus aviumSorghum bicolor86.57100.2294.281347forward
CNT30117075Prunus aviumOryza nivara77.7698.1394.791210forward

Expression of CNT30705843

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MKFQRLPGPVGQGYRLVEYIIVARVRPRTSKSITDLLLPHTSLA*

>peptide 2 (66 aa)
MSPVLLFIVTTFPCQDWVICAPAAFLGCGSRFSGSLSGIEPYFSVTRHHHGRPLSYHRKLIGQIFE*

>peptide 3 (44 aa)
MLSQLFVFHKSENFTSDYEIRMPPSVPVNHYFDPEGQQNRTEIL*

>peptide 4 (43 aa)
MIRFSGLLATSRAANHPRRRDPNTSPNHSIGRSDGRCVQRAGM*

>peptide 5 (44 aa)
MHPFQKSGFVARISSRITTVIRVVDTIKQTITDLMSHSQFHSLN*

>peptide 6 (38 aa)
LRLLLPLNDKVQWTSSDVAGSEPPTSPRSEHFTEPFNR*

>peptide 7 (35 aa)
MVETRTVFDRLRAPNFRSCLMKTSLANAFAVVRLS*

>peptide 8 (32 aa)
MKYECPRVSLLIITSIPKANRIGPKSYDVIPC*

Sequence

>CNT30705843
CTACGACTTCTCCTTCCTCTAAATGATAAGGTTCAGTGGACTTCTAGCGACGTCGCGGGCAGCGAACCACCCACGTCGCCGCGATCCGAACACTTCACCG
AACCATTCAATCGGTAGAAGCGACGGGCGGTGTGTACAAAGGGCAGGGATGTAGTCAACGCGAGCTGATGACTCGCGCTTACTAGGAATTCCTCATTGAA
GACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGGCCTGTCGGCCAAGGCTATAGACTCGTTGAATACATCATTGTAG
CGCGCGTGCGGCCCAGAACATCTAAGAGCATCACAGACCTGTTATTGCCTCACACTTCCTTGGCCTAAGCGGCCATAGTCCCTCTAAGAAGCTGGCCGCG
GAGGGATCCTCCGCATAGCTAGTTAGCAGGCTCCACTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCCTTGCGACCATACTCCCCCCGGAA
CCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTAAAAGTAACATCCGCCGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTAT
TTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGTTTAATGAAAACATCCTTGGCAAATGCTTTCGCAGTTGTTCGTCTTTCATAAATCCGAGAATTTCA
CCTCTGACTATGAAATACGAATGCCCCCGAGTGTCCCTGTTAATCATTACTTCGATCCCGAAGGCCAACAGAATAGGACCGAAATCTTATGATGTTATCC
CATGCTAATGTATCCAGAGCGTAGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGCACCGGAGGCACGACCCGGCCAATTAAGGCCAGGAGCGT
ATCGCCGGTAGAAGGGACGAGCCGACCGGTCCAACTACGAGCTTTTTAACTGCAACAACTTAAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTG
GCACCAGACTTGCCCTCCAATGGGTCCTCGTTAAGGGATTTAGATTGTACTCATTCCAATTACCGGACTCTATGAGCCCGGTATTGTTATTTATTGTCAC
TACCTTCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGTCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTACTTC
TCCGTCACCCGTCACCACCATGGTAGGCCACTATCCTATCATCGAAAGTTGATAGGGCAGATATTTGAATGATGCGTCGCTAGCACGATGGCTGTGCGAT
CTGTCGAGTTATCATGAATCATCAGAGCAACGGGCAGAGCCCGCGTCAGCCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGT
ATTAGCTCTAGAATTACTACGGTTATCCGAGTAGTAGATACCATCAAACAAACTATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTCTGAATTAGT
TCATACTTACACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAGG