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Detailed information on CNT3070573


BLAST search results

BLAST vs Swiss-Prot:
sp|P35007|SAHH_CATRO, E-value = 2e-77

BLAST vs NONCODE:
NONBNAT006042, E-value = 1e-66

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30628366Quercus suberVigna unguiculata25.0713.1686.7188forward

Expression of CNT3070573

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MSRPSANTMMPEFVSGKTHLSVWGLMVIRF

Sequence

>CNT3070573
AAAAAAAAAAGTTATATTGCAAATGAAATAGACCAGAAAGTCTAGAGTAGAGAGCCACCAAATCAAGACAGGAACCTAAGGAAATAACAGTCCTTTTTTT
AGGTTTTAATAACAAATGCAACAAAAACTCAACAGCATTAGCCAGTAATATATTCCCACACAGCCCCATCCAACCCTTATTGAAACCCCAATTGGTCTTC
TTTCAAAAGAGACCAACCAATTTCTTTCCTCCATAACATCCACCACCAAACACAAAAGCCCCTACCAAAAAAAAAATTCAAAACCTAACATCCTAATAAA
AGTCATAATTTTGTAAAAGAAACCATCAAGCCGATCCAAATATTAATATATTGGTTTTCTCGATTTTCCTTGTTTTCTTGACTCTTCTCAGTACCTGTAG
TGAGCAGGCTTGTATGGACCCTCCACAGGGACACTAATGTAGTCAGCCTGGTCCTTGCTGAGCTTGGTGAGCCTAGCCCCAAGTTTGCCAAGGTGAAGTG
CAGCAACCTTCTCATCAAGGTGCTTTGGCAAGACATAGACCTTCTTCTCATACTTCCCGGTAGTCCTCTCCTTCCACAGCTCAAGCTGTGCAATCACCTG
GTTTGTGAATGAACAAGACATCACGAAACTTGGGTGCCCTGTGGCACAACCCAAGTTCATGAGCCGACCCTCAGCCAACACAATGATGCCTGAGTTTGTA
TCAGGGAAGACCCACCTGTCTGTTTGGGGCTTGATGGTGATACGCTTCAC