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Detailed information on CNT30705729


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30630038Prunus aviumVigna unguiculata21.0515.2382.69104forward
CNT30571726Prunus aviumVitis vinifera72.8776.4381.67360forward
CNT3021748Prunus aviumPopulus trichocarpa59.9232.1781.76296forward

Expression of CNT30705729

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MKRRASSPPGSQGRKMSNNSEDPPRCLSL*

>peptide 2 (64 aa)
MQGANVLRLYTISCPGKRATKKVLIFNINEILCTSNSMDISVLNASVNDVILPTNKPSIGRIFRC

Sequence

>CNT30705729
TCATCATCTTGGTATGAACATAAATCATGAAGCGCCGGGCTTCTTCACCTCCCGGTTCCCAAGGCAGAAAAATGTCAAATAATTCCGAGGATCCTCCTCG
ATGCCTTTCTCTTTAAAACTGTGAAAAATATCTGCATACATCATATCCATAGTCCTCCTCTGCCAGTCTAATATTGCCTGAACAGATGCTGACTCTGGGA
TCCCCTCTGGCCACATTGGGACAACGACATAGACAGTAAACCTCTCTCCTTTTTCAATCTTGTCACAAATCTTAAGCGAAAGCTCCCTTGGAATTACATG
CAAGGCGCCAATGTCCTCAGGCTTTATACCATCAGCTGCCCAGGCAAAAGAGCTACCAAGAAAGTACTGATTTTCAATATAAATGAAATTCTTTGCACGT
CGAATAGCATGGATATAAGCGTCCTGAATGCTTCGGTCAATGATGTTATCCTTCCCACTAACAAGCCCAGCATTGGCCGCATCTTCAGGTGTAT