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Detailed information on CNT30705707


BLAST search results

BLAST vs Swiss-Prot:
sp|P13951|RBS_SINAL, E-value = 2e-33

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30535656Prunus aviumEucalyptus grandis16.1536.485.71182forward
CNT30317063Prunus aviumCorylus avellana16.532.1884.41186forward
CNT30512567Prunus aviumJuglans regia16.4244.2683.24185forward
CNT30372132Prunus aviumArabidopsis thaliana15.8827.7182.68179forward
CNT30268359Prunus aviumChenopodium quinoa16.532.1287.1186forward
CNT30727208Prunus aviumCorchorus capsularis16.521.1486.56186forward
CNT3069740Prunus aviumQuercus suber16.520.5386.02186forward
CNT30525413Prunus aviumPhaseolus vulgaris17.0424.7185.42192forward
CNT30629523Prunus aviumVigna unguiculata15.7122.4387.01177forward
CNT30508072Prunus aviumNicotiana attenuata16.1521.2981.87182forward
CNT30712618Prunus aviumGlycine max17.5733.985.86198forward
CNT30166270Prunus aviumPistacia vera16.4228.4282.16185forward
CNT30633374Prunus aviumCapsicum annuum15.8820.8684.92179forward
CNT3091655Prunus aviumSolanum tuberosum16.4230.5883.78185forward
CNT30565204Prunus aviumActinidia chinensis15.6228.981.25176forward
CNT3083932Prunus aviumVigna radiata17.1323.0982.9193forward
CNT30545373Prunus aviumBrassica napus14.5526.8981.71164forward
CNT30310235Prunus aviumCamelina sativa15.8821.0184.36179forward
CNT3061892Prunus aviumArabidopsis lyrata20.3228.7382.1229forward
CNT3075084Prunus aviumBrassica juncea15.8820.6282.12179forward
CNT30261239Prunus aviumBrassica rapa15.6222.2881.25176forward
CNT30605276Prunus aviumGossypium raimondii17.1348.8683.94193forward
CNT30648517Prunus aviumRosa chinensis17.2138.0488.66194forward
CNT30715955Prunus aviumMalus domestica golden9.3238.0490.48105forward
CNT30479552Prunus aviumArabidopsis halleri15.8831.1881.56179forward
CNT30355778Prunus aviumLactuca sativa1521.582.25169forward
CNT30153087Prunus aviumPrunus persica14.6470.8298.79165forward
CNT30422416Prunus aviumPapaver somniferum15.8824.4581.01179forward
CNT3026569Prunus aviumPopulus trichocarpa15.7946.686.52178forward
CNT3038822Prunus aviumCucumis melo16.4241.5783.24185forward
CNT30176025Prunus aviumVigna angularis14.8226.0983.23167forward
CNT30335392Prunus aviumCynara cardunculus17.0423.5682.81192forward
CNT30725197Prunus aviumLupinus angustifolius16.526.3583.87186forward

Expression of CNT30705707

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MIRMKELGLAFLASSSSCNTWEESVHPNMGSFHMVQYLPS*

>peptide 2 (54 aa)
MLISSLTFMHCTLPPLLAMEVMSLVFLVPGKAEADLRPVNGATKLACAGAARSA*

>peptide 3 (43 aa)
IQTENGYHLIHEYSQHHIMNPKNTSKTKEIVSKKGKERNERRS*

>peptide 4 (55 aa)
MKKVVFCCDMLGYHTVIQTIHLNIDKLCISVPREVVTSTCIWAYCFECKLIVATC*

Sequence

>CNT30705707
TTATTCAAACAGAAAACGGATATCATCTTATTCATGAATATTCTCAACACCACATTATGAATCCGAAAAACACTTCGAAAACAAAGGAAATTGTCTCGAA
AAAGGGAAAAGAAAGAAACGAACGAAGGTCTTGAAAGGCCTAATTAAGTACAGACTTAAACAAACCACCGAGAACCTTGGCTAATAAGCCACAAACAACA
TAAAATGAAAATCATGAAACTTGAAATTAGTAGCCTGAAGGCTTGTAGGCGATGAAACTGATGCACTGCACTTGACGAACGTTGTCGAATCCGATGATAC
GGATGAAGGAGTTGGGGTTAGCCTTCTTGGCCTCCTCGAGCTCTTGCAACACTTGGGAAGAGTCTGTGCATCCAAACATGGGCAGCTTCCACATGGTCCA
GTACCTTCCATCATAGTACCCTGGGAACCCAGTTTTTGCGGAGAAGGTAGTCTACTTCCTTAGCCAAACCCTCAGGTGAGAGTGGTGGAAGGTAGGAGAG
AGTCTCGAACTTCTTCAGTCCAACTGTAGGCCACACCTGTATCAATCAAAATATTCTATAAATCGATGTTCTAGTACTTCGATTAGTACCTTCTTGGCCA
AAAAATCAGAGGAACTATTAGTAATTAGCGTCCAGGAAGCACACGAAAGGATTAGTAAGCTTGGAACTAAACTACATTATCTTTAAATCTAGTTAATAGT
GGGTATATAAATATGCTACGATTATGAAAAAAGTTGTATTTTGCTGCGACATGTTAGGTTATCATACCGTAATTCAGACTATTCATTTGAATATTGACAA
GTTATGTATTTCCGTCCCCCGTGAAGTAGTTACTTCAACATGTATTTGGGCATATTGTTTTGAATGTAAATTAATTGTAGCAACATGTTGATAAGTAGTC
TTACCTTCATGCATTGCACTCTTCCACCATTGCTTGCAATGGAGGTGATGTCATTGGTCTTCTTGGTGCCGGGGAAAGCTGAGGCAGACTTGAGGCCAGT
GAATGGTGCAACCAAGCTAGCTTGTGCCGGGGCGGCACGATCAGCGTAAACCGAAGCCACGGTAGCGGAAGAAATCATGGAGGAAGCCATTGCTCTGTGC
TCTCTTTAGCCCTCTTCTTTGCTAGAG