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Detailed information on CNT30705533


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696190Prunus aviumOryza sativa13.3728.3383.48115reverse complement
CNT30505046Prunus aviumNicotiana attenuata60.8158.3782.6523forward
CNT3047594Prunus aviumPrunus dulcis21.1625.9398.9182reverse complement
CNT30635928Prunus aviumCapsicum annuum1529.1985.27129reverse complement
CNT30396291Prunus aviumTriticum turgidum14.8833.2583.59128forward
CNT30559437Prunus aviumActinidia chinensis31.2866.0981.41269forward
CNT30585847Prunus aviumMusa acuminata18.624.585160reverse complement
CNT30229743Prunus aviumAnanas comosus13.725087.29118reverse complement
CNT30713541Prunus aviumMalus domestica golden8.1432.5697.1470forward
CNT30119130Prunus aviumCitrus clementina2522.3785.12215reverse complement
CNT30585629Prunus aviumEchinochloa crusgalli14.8829.3682.81128reverse complement

Expression of CNT30705533

Peptides detected in this lncRNA

>peptide 1 (57 aa)
MHKIRLKTNPNDSLGRMAERTRNLFIYSERSCHRRILQLNVERVNIRPRIFFISKFY*

Sequence

>CNT30705533
AAAAACCCTCTATAAGGTTGAATAAAAATTCGATTAATCGTTTGATATAATTGCTATGCTTAGTGTGTGACTCGTTGGTTTTTTTAGGATTATAGGATTC
AACAAAATCGACCGGCCCGTAGTACGAACTGATAACTATAGAACTAATAATCAACTCATCTCTTCGCATTATTTGGATATAAGGAACCAGTCAAGATATG
ATATATGAGTCATATCATTGTAGTAACTGAAATCATTTTTGCATAAACACAAAAGAAAAACCAATCTGATTATGAGTTGTAAAGCAATAAAAGTATACAG
ATAAATGGAAGGGTGAGAGAAAGATAGGAAAAGAAATATCAATGATATATAATTCCAATATGTAAGGTCTATGAGTCATCTCATATAAAGGGAATGTAAT
AAAGCATCAATACTGATTGATCCATAATTAGACAAATCGGTGCATAGAAGAAAAAATCAAGAGCCCTGAGCCAATAAAGACTGAGAAGGTTGACTCAAGA
AAAAATTTCATTCATTAATAAATTTCATTATGGGCTCCATTTCATTAAGGGCTCCGTTGTAGAATTCAGACCTAACCATTAATCGAGAAGTGGTGGGGAC
GACAGAACCTGTGAATGCATAAGATTCGATTGAAAACGAATCCTAATGATTCATTGGGTAGGATGGCGGAACGAACCAGAAACCTATTCATTTATTCTGA
GAGGTCATGTCATAGACGAATCTTACAATTGAATGTTGAAAGAGTAAATATTCGCCCGCGAATTTTTTTTATTTCTAAATTTTACTAAATTTTAGTCGAT
TCGATATGATAATACAAAGGAAAAATAAAATAAAGATTCATTATAACGTTATATAAAAAC