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Detailed information on CNT30705531

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT003894, E-value = 3e-77

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30676981	Prunus avium	Setaria viridis	96.79	43.22	87.45	271	reverse complement
CNT30521637	Prunus avium	Setaria italica	79.64	43.9	93.27	223	reverse complement
CNT30617317	Prunus avium	Sesamum indicum	67.5	56.76	95.24	189	reverse complement
CNT30712450	Prunus avium	Glycine max	35.71	35.21	94	100	reverse complement
CNT30638683	Prunus avium	Capsicum annuum	97.5	52.91	91.94	273	forward
CNT30178555	Prunus avium	Secale cereale	100	33.25	92.14	280	reverse complement
CNT30309040	Prunus avium	Triticum aestivum	100	66.83	92.14	280	forward
CNT30444225	Prunus avium	Aegilops tauschii	100	25.36	91.43	280	reverse complement
CNT30668159	Prunus avium	Triticum dicoccoides	95.71	37.54	89.55	268	reverse complement
CNT3082954	Prunus avium	Brassica juncea	52.86	12.54	89.86	148	reverse complement
CNT30136065	Prunus avium	Lolium perenne	100	43.61	91.79	280	reverse complement
CNT30609809	Prunus avium	Gossypium raimondii	58.21	38.35	88.34	163	reverse complement
CNT30713553	Prunus avium	Malus domestica golden	99.64	41.39	96.42	279	reverse complement
CNT30627950	Prunus avium	Daucus carota	97.5	63.49	94.14	273	reverse complement
CNT30364730	Prunus avium	Sorghum bicolor	100	49.38	90.71	280	forward
CNT30154922	Prunus avium	Prunus persica	95.36	15.81	94.38	267	forward
CNT30332809	Prunus avium	Dioscorea rotundata	100	40.52	94.29	280	forward
CNT30574740	Prunus avium	Oryza barthii	35.36	20.12	90.91	99	reverse complement
CNT30585638	Prunus avium	Echinochloa crusgalli	100	18.09	91.79	280	reverse complement
CNT30604668	Prunus avium	Oryza punctata	100	63.78	91.43	280	reverse complement

Expression of CNT30705531

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MDKPCGGTLRFSGHWILTNVCVTQADILASASSTAARAGASL*

>peptide 2 (33 aa)
NHLSANLASSVPRDQQGVVQEYSPVVHRLRLLA*

>peptide 3 (32 aa)
MFALLKPTFSLPLRPPPLARVLPSRQNAPLPMH

Sequence

>CNT30705531
AAACCATCTTTCAGCTAACCTAGCCTCCTCTGTCCCTCGGGACCAACAAGGGGTAGTACAGGAATATTCACCTGTTGTCCATCGACTACGCCTTTTGGCC
TAATCTTAGGCCCTGACTCACCCTTCATGGACAAACCTTGCGGAGGAACCCTTAGGTTTTCAGGGCATTGGATTCTCACCAATGTTTGCGTTACTCAAGC
CGACATTCTCGCTTCCGCTTCGTCCACCGCCGCTCGCGCGGGTGCTTCCCTCTAGGCAGAACGCTCCCCTACCAATGCAT