Detailed information on CNT30705229


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3047103Prunus aviumPrunus dulcis64.4649.8698.29350forward
CNT30172764Prunus aviumTrifolium pratense19.5229.7882.08106forward
CNT30653585Prunus aviumRosa chinensis24.3114.3892.42132forward
CNT30155224Prunus aviumPrunus persica41.6241.6296.9226forward

Expression of CNT30705229

Peptides detected in this lncRNA

>peptide 1 (30 aa)
PSIASLMAFSLLKVTKPKPLDLPVSRSLMI*

>peptide 2 (58 aa)
MAARPNRVRSDLCVKRTFDSMISPNGEKALSSASLSVAQASPPTKQRNSISAEAIAKK*

>peptide 3 (52 aa)
AFDRVPHGLLIAEGDKAEAPGPPGLTVVDDLKAQKRTKSNQIHPYNQNKYTK*

Sequence

>CNT30705229
GCCTTCGATCGCGTCCCTCATGGCCTTCTCATTGCTGAAGGTGACAAAGCCGAAGCCCCTGGACCTCCCGGTCTCACGGTCGTTGATGATCTGAAAGCAC
AAAAACGAACCAAATCGAATCAGATCCATCCATATAATCAAAACAAATACACAAAATAAGCGAAAATGAAAAGGAACCGATCGATCTTCAATCTTTGGGA
GAGAAAGATGAAGATGAACGTACCCGATCTTGAGAGTGAGTAATAATAAGAATCATATAGTAACAGAGAATCATAGATCAAGTAACATAGAGAAACAGAA
GATCAAGTAGCAGAGAGAGAACAACAGATGGCCGCGAGGCCGAATCGGGTCAGATCCGATCTCTGCGTCAAACGGACCTTCGATTCGATGATCTCACCGA
ACGGAGAAAAGGCCCTCTCCAGCGCATCATTGTCGGTGGCCCAGGCGAGCCCTCCGACGAAGCAACGGAACTCGATCTCGGCAGAGGCCATTGCTAAAAA
GTAACCGGAGAAAAGAGAACTGGAATTTTAGAAGAAGGAAGAA